Comparison of TTLshort vs TTLlong ALL xenograft samples according to differentially expressed small RNAs
Small RNA . | LFC . | Reads . | Benjamini-Hochberg adjusted P . | |
---|---|---|---|---|
TTLlong . | TTLshort . | |||
hsa-miR-7974 | 2.2 | 68 | 330 | .07 |
hsa-miR-29c-5p | 1.5 | 72 | 172 | .00 |
hsa-miR-532-3p | −0.9 | 207 | 108 | .04 |
hsa-miR-532-5p | −1.0 | 2643 | 1282 | .02 |
hsa-miR-660-5p | −1.0 | 1868 | 875 | .07 |
hsa-miR-188-5p | −1.2 | 138 | 63 | .05 |
hsa-miR-502-3p | −1.5 | 136 | 51 | .00 |
hsa-miR-501-5p | −2.3 | 47 | 12 | .01 |
hsa-miR-195-5p | −2.4 | 2559 | 553 | .07 |
hsa-miR-497-5p | −2.7 | 2294 | 389 | .08 |
chr21_24250-3p | −3.2 | 114 | 3 | .07 |
hsa-miR-371b-5p | −3.4 | 307 | 13 | .04 |
hsa-miR-371a-5p | −5.4 | 59 | 0 | .00 |
Small RNA . | LFC . | Reads . | Benjamini-Hochberg adjusted P . | |
---|---|---|---|---|
TTLlong . | TTLshort . | |||
hsa-miR-7974 | 2.2 | 68 | 330 | .07 |
hsa-miR-29c-5p | 1.5 | 72 | 172 | .00 |
hsa-miR-532-3p | −0.9 | 207 | 108 | .04 |
hsa-miR-532-5p | −1.0 | 2643 | 1282 | .02 |
hsa-miR-660-5p | −1.0 | 1868 | 875 | .07 |
hsa-miR-188-5p | −1.2 | 138 | 63 | .05 |
hsa-miR-502-3p | −1.5 | 136 | 51 | .00 |
hsa-miR-501-5p | −2.3 | 47 | 12 | .01 |
hsa-miR-195-5p | −2.4 | 2559 | 553 | .07 |
hsa-miR-497-5p | −2.7 | 2294 | 389 | .08 |
chr21_24250-3p | −3.2 | 114 | 3 | .07 |
hsa-miR-371b-5p | −3.4 | 307 | 13 | .04 |
hsa-miR-371a-5p | −5.4 | 59 | 0 | .00 |
Small RNA-seq, N = 13; total leukemia samples; TTLshort, n = 6; TTLlong, n = 7. Reads are mean of normalized read count from DESeq2 (a tool for differential gene expression analysis of RNA-seq data; see supplemental Figure 1A).
LFC, logarithmic (log2) fold change.