Table 2.

Summary of candidate variant results

Outcome, cohort, and genomeNumber of discovery variants*Number of discovery signalsNumber of replicated signals
aGVHD§ 
 All donors 
 All recipients 
 10/10 HLA-matched sibling donors 10 
 10/10 HLA-matched sibling recipients 
 10/10 HLA-matched unrelated donors 
 10/10 HLA-matched unrelated recipients 12 
cGVHD 
 All donors 
 All recipients 
 10/10 HLA-matched sibling donors 
 10/10 HLA-matched sibling recipients 
 10/10 HLA-matched unrelated donors 
 10/10 HLA-matched unrelated recipients 
Relapse 
 All donors 
 All recipients 
 10/10 HLA-matched sibling donors 
 10/10 HLA-matched sibling recipients 
 10/10 HLA-matched unrelated donors 
 10/10 HLA-matched unrelated recipients 
Outcome, cohort, and genomeNumber of discovery variants*Number of discovery signalsNumber of replicated signals
aGVHD§ 
 All donors 
 All recipients 
 10/10 HLA-matched sibling donors 10 
 10/10 HLA-matched sibling recipients 
 10/10 HLA-matched unrelated donors 
 10/10 HLA-matched unrelated recipients 12 
cGVHD 
 All donors 
 All recipients 
 10/10 HLA-matched sibling donors 
 10/10 HLA-matched sibling recipients 
 10/10 HLA-matched unrelated donors 
 10/10 HLA-matched unrelated recipients 
Relapse 
 All donors 
 All recipients 
 10/10 HLA-matched sibling donors 
 10/10 HLA-matched sibling recipients 
 10/10 HLA-matched unrelated donors 
 10/10 HLA-matched unrelated recipients 
*

P < .005; counts do not include different genetic models for the same outcome.

Groups of variants with r2 > 0.7.

Threshold P values corrected for the number of discovery signals.

§

Different subcategories of aGVHD associated with the same variant are counted only once.

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