Table 1.

T-cell states in cancer

T-cell compartmentSubpopulationPhenotype/signature genesFunctionOther remarks
Memory T cells (reduced overall clonal expansion) Stem cell memory T cells19  TCF1
IL7R
CD62L
CCR7 
Display increased proliferative capacity and mediate superior antitumor responses compared with known memory populations Do not exhibit tumor-specific localization
Retain the ability to regenerate a vast progeny of effector cells 
Central memory T cells20  TCF1
IL7R
CCR7 
Express lymph node homing receptors and lack immediate effector function, but efficiently stimulate DCs and differentiate into CCR7 effector cells upon secondary stimulation 
Effector memory T cells20  TCF1
IL7R
CD62L 
Express receptors for migration to inflamed tissues and display rapid production of IFN-γ and immediate effector function 
Exhausted T cells (highly clonotypically expanded)17  TPEX PD1
CTLA4
LAG3
TOX
CD62L
TCF1 
Are early dysfunctional T cells
A subset of predysfunctional (or “transitional”) T cells is defined by high expression of GZMK
Lack effector functions 
Can self-renew and differentiate and are a reservoir of TEX cells
Are often found in lymph nodes and TLS
Responsible for immunotherapy efficacy 
TEX PD1
CTLA4
LAG3
TIM3
CD39
TOX
CXCL13
BCL2L11 
Have impaired cytotoxic function (gradually lose effector functions) Even if terminally differentiated, TEX can proliferate in an antigen-dependent fashion 
Tissue-resident memory–like TEX CD103
HOBIT (ZNF683
Represent a continuum in the spectrum of TIL phenotypes
Have high cytotoxic potential
Express high levels of inhibitory molecules 
Likely reflect a variation of TEX differentiation in the TME 
NK-cell receptor–positive TEX CD8
KLRG1
CD57
Bcl2
LAG3 
Are dysfunctional (ie, have reduced cytotoxicity against autologous AML blasts) Are more abundant in R/R AML but can also be detected in mice with LCMV infection, in which they may be dependent on the transcription factor Zeb221,22  
Stress response state (TSTR)23  Both CD8+ and CD4+ T cells Stress-related heat shock genes (HSPA1A, HSPA1B);
NF-κB signaling molecules 
Are highly correlated with IFN-response CD4+ and CD8+ T-cell subsets Are detectable in situ in the TME across various cancer types (especially those with aggressive phenotypes)
Have a potential role in immunotherapy resistance 
T-cell compartmentSubpopulationPhenotype/signature genesFunctionOther remarks
Memory T cells (reduced overall clonal expansion) Stem cell memory T cells19  TCF1
IL7R
CD62L
CCR7 
Display increased proliferative capacity and mediate superior antitumor responses compared with known memory populations Do not exhibit tumor-specific localization
Retain the ability to regenerate a vast progeny of effector cells 
Central memory T cells20  TCF1
IL7R
CCR7 
Express lymph node homing receptors and lack immediate effector function, but efficiently stimulate DCs and differentiate into CCR7 effector cells upon secondary stimulation 
Effector memory T cells20  TCF1
IL7R
CD62L 
Express receptors for migration to inflamed tissues and display rapid production of IFN-γ and immediate effector function 
Exhausted T cells (highly clonotypically expanded)17  TPEX PD1
CTLA4
LAG3
TOX
CD62L
TCF1 
Are early dysfunctional T cells
A subset of predysfunctional (or “transitional”) T cells is defined by high expression of GZMK
Lack effector functions 
Can self-renew and differentiate and are a reservoir of TEX cells
Are often found in lymph nodes and TLS
Responsible for immunotherapy efficacy 
TEX PD1
CTLA4
LAG3
TIM3
CD39
TOX
CXCL13
BCL2L11 
Have impaired cytotoxic function (gradually lose effector functions) Even if terminally differentiated, TEX can proliferate in an antigen-dependent fashion 
Tissue-resident memory–like TEX CD103
HOBIT (ZNF683
Represent a continuum in the spectrum of TIL phenotypes
Have high cytotoxic potential
Express high levels of inhibitory molecules 
Likely reflect a variation of TEX differentiation in the TME 
NK-cell receptor–positive TEX CD8
KLRG1
CD57
Bcl2
LAG3 
Are dysfunctional (ie, have reduced cytotoxicity against autologous AML blasts) Are more abundant in R/R AML but can also be detected in mice with LCMV infection, in which they may be dependent on the transcription factor Zeb221,22  
Stress response state (TSTR)23  Both CD8+ and CD4+ T cells Stress-related heat shock genes (HSPA1A, HSPA1B);
NF-κB signaling molecules 
Are highly correlated with IFN-response CD4+ and CD8+ T-cell subsets Are detectable in situ in the TME across various cancer types (especially those with aggressive phenotypes)
Have a potential role in immunotherapy resistance 

Intratumoral T cells are characterized by a remarkable phenotypic and functional diversity. This gradient of T-cell states has been described mostly for CD8+ TILs residing along a continuum of dysfunction.17,24 The current status of CD4+ T cells in cancer has been reviewed elsewhere.25 HOBIT, homologue of BLIMP1 in T cell; TCF1, T-cell–specific transcription factor 1; TEX cells, terminally exhausted T cells; TILs, tumor-infiltrating lymphocytes; TIM3, T-cell immunoglobulin mucin receptor; TLS, tertiary lymphoid structures; TOX, thymocyte selection–associated high mobility group box protein.

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