High frequency of TP53 mutation, del(17p), and del(18p) in our cohort compared with published cohorts
Genetic abnormality . | Current study (N = 9) . | Comparison with published cohorts . | |||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Untreated/unspecified . | Treated/relapsed . | CLL phase of RT . | |||||||||||||||||
Campo (N = 506) . | CLL8 trial (N = 635)* . | ERIC (N = 827)* . | Chaganti (N = 228) . | Wu (N = 538) . | ERIC (N = 1562)* . | Chaganti (N = 60) . | Wu (N = 59) . | Bertoni (N = 28) . | |||||||||||
% . | % . | P . | % . | P . | % . | P . | % . | P . | % . | P . | % . | P . | % . | P . | % . | P . | % . | P . | |
SF3B1 | 22 | 8 | .11 | 18 | .77 | 3 | 6.90e-04† | 21 | .93 | 16 | .62 | ||||||||
TP53 | 89 | 5 | <2.2e-16† | 11 | 3.40e-12† | 4 | <2.2e-16† | 7 | <2.2e-16† | 13 | 2.40e-11† | 29 | 4.90e-04† | ||||||
del(17p) | 89 | 4 | <2.2e-16† | 8 | 2.54e-16† | 3 | <2.2e-16† | 4 | <2.2e-16† | 6 | <2.2e-16† | 10 | 1.76e-14† | 13 | 5.49e-07† | 24 | 9.94e-05† | 32 | .002962† |
del(18p) | 56 | 2 | <2.2e-16† | 4 | 1.20e-10† | 2 | <2.2e-16† | 3 | 1.30e-06† | 7 | 5.80e-05† | 11 | .0045† | ||||||
del(13q) | 56 | 50 | .74 | 57 | .94 | 48 | .66 | 55 | .9862 | 47 | .63 | 33 | .15 | 50 | .76 | 22 | .034‡ | 32 | .21 |
8q gain (MYC) | 33 | 2 | 4.40e-08† | 4 | 3.00e-05† | 3 | 3.50e-07† | 5 | .005† | ||||||||||
del(8p) | 33 | 1 | 5.77e-12† | 4 | 3.03e-05† | 4 | 6.39e-06† | 5 | .0049† | 11 | .11 | ||||||||
del(9p) (CDKN2A) | 33 | 0 | <2.2e-16† | 0 | <2.2e-16† | 0 | 4.80e-06† | ||||||||||||
Tri12 | 33 | 14 | .11 | 12 | .052 | 13 | .066 | 14 | .1095 | 13 | .084 | 17 | .21 | 8 | .029‡ | 7 | .015‡ | 29 | .79 |
del(6q21) | 22 | 2 | 1.40e-04† | 2 | 5.00e-04† | 3 | .0027† | 5 | .063 | 7 | .13 | ||||||||
del(14q) | 22 | 5 | .029‡ |
Genetic abnormality . | Current study (N = 9) . | Comparison with published cohorts . | |||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Untreated/unspecified . | Treated/relapsed . | CLL phase of RT . | |||||||||||||||||
Campo (N = 506) . | CLL8 trial (N = 635)* . | ERIC (N = 827)* . | Chaganti (N = 228) . | Wu (N = 538) . | ERIC (N = 1562)* . | Chaganti (N = 60) . | Wu (N = 59) . | Bertoni (N = 28) . | |||||||||||
% . | % . | P . | % . | P . | % . | P . | % . | P . | % . | P . | % . | P . | % . | P . | % . | P . | % . | P . | |
SF3B1 | 22 | 8 | .11 | 18 | .77 | 3 | 6.90e-04† | 21 | .93 | 16 | .62 | ||||||||
TP53 | 89 | 5 | <2.2e-16† | 11 | 3.40e-12† | 4 | <2.2e-16† | 7 | <2.2e-16† | 13 | 2.40e-11† | 29 | 4.90e-04† | ||||||
del(17p) | 89 | 4 | <2.2e-16† | 8 | 2.54e-16† | 3 | <2.2e-16† | 4 | <2.2e-16† | 6 | <2.2e-16† | 10 | 1.76e-14† | 13 | 5.49e-07† | 24 | 9.94e-05† | 32 | .002962† |
del(18p) | 56 | 2 | <2.2e-16† | 4 | 1.20e-10† | 2 | <2.2e-16† | 3 | 1.30e-06† | 7 | 5.80e-05† | 11 | .0045† | ||||||
del(13q) | 56 | 50 | .74 | 57 | .94 | 48 | .66 | 55 | .9862 | 47 | .63 | 33 | .15 | 50 | .76 | 22 | .034‡ | 32 | .21 |
8q gain (MYC) | 33 | 2 | 4.40e-08† | 4 | 3.00e-05† | 3 | 3.50e-07† | 5 | .005† | ||||||||||
del(8p) | 33 | 1 | 5.77e-12† | 4 | 3.03e-05† | 4 | 6.39e-06† | 5 | .0049† | 11 | .11 | ||||||||
del(9p) (CDKN2A) | 33 | 0 | <2.2e-16† | 0 | <2.2e-16† | 0 | 4.80e-06† | ||||||||||||
Tri12 | 33 | 14 | .11 | 12 | .052 | 13 | .066 | 14 | .1095 | 13 | .084 | 17 | .21 | 8 | .029‡ | 7 | .015‡ | 29 | .79 |
del(6q21) | 22 | 2 | 1.40e-04† | 2 | 5.00e-04† | 3 | .0027† | 5 | .063 | 7 | .13 | ||||||||
del(14q) | 22 | 5 | .029‡ |