Table 1

Up- or down-regulated genes by both the NUP98/HHEX and the NUP98/HOXA9 fusions in primary murine bone marrow cells

Gene nameFold change*
NUP98/HOXA9NUP98/HHEX
Prion protein (Prnp2.3 2.3 
Carbonic anhydrase 1(Car14.7 1.5 
Hemoglobin, beta adult minor chain (Hbb-b23.1 3.4 
CD28 antigen 4.2 1.8 
Rab38, member of RAS oncogene family (Rab382.4 1.6 
Hemoglobin alpha, adult chain 1 (Hba-a11.7 1.9 
Myosin light chain 2, precursor lymphocyte-specific (Mylc2pl) 4.7 1.9 
Pre B-cell leukemia transcription factor 3 (Pbx35.4 1.9 
Myocyte enhancer factor 2C (Mef2c2.0 1.6 
Calcitonin receptor-like (Calcrl5.6 1.7 
Transcription factor 12 (Tcf121.8 2.1 
Hemoglobin alpha, adult chain 1 (Hba-a11.7 2.0 
Prion protein (Prnp3.2 3.1 
Homeo box A5 (Hoxa512.1 1.7 
RIKEN cDNA 4732435N03 gene 2.3 1.5 
Hemoglobin alpha, adult chain 1 (Hba-a12.4 2.9 
Homeo box A9 (Hoxa911.3 2.4 
Cysteine-rich secretory protein 1 (Crisp1126.5 −1.6 
Kit oncogene (Kit−2.8 −1.9 
Small muscle protein, X-linked (Smpx−2.4 −2.2 
Aldo-keto reductase family 1, member C18 (Akr1c18−2.8 2.6 
Complement component 3a receptor 1 (C3ar1−1.9 −2.2 
Cytokine-dependent hematopoietic cell linker (Clnk−2.5 −1.7 
Heparan sulfate 6-O-sulfotransferase 2 (Hs6st2−2.3 −1.9 
3'-phosphoadenosine 5'-phosphosulfate synthase 2 (Papss2−2.5 −1.6 
Mast cell protease 1 (Mcpt1−10.4 −4.2 
Reprimo, TP53 dependent G2 arrest mediator candidate (Rprm−1.9 −1.8 
Elastase 2, neutrophil (Ela2−2.4 −1.6 
Mast cell protease 4 (Mcpt4−10.0 −3.1 
Tryptase alpha/beta 1 (Tpsab1−15.4 −2.2 
Heparan sulfate 6-O-sulfotransferase 2 (Hs6st2−4.8 −3.0 
Kit oncogene (Kit−2.5 −1.9 
Gene nameFold change*
NUP98/HOXA9NUP98/HHEX
Prion protein (Prnp2.3 2.3 
Carbonic anhydrase 1(Car14.7 1.5 
Hemoglobin, beta adult minor chain (Hbb-b23.1 3.4 
CD28 antigen 4.2 1.8 
Rab38, member of RAS oncogene family (Rab382.4 1.6 
Hemoglobin alpha, adult chain 1 (Hba-a11.7 1.9 
Myosin light chain 2, precursor lymphocyte-specific (Mylc2pl) 4.7 1.9 
Pre B-cell leukemia transcription factor 3 (Pbx35.4 1.9 
Myocyte enhancer factor 2C (Mef2c2.0 1.6 
Calcitonin receptor-like (Calcrl5.6 1.7 
Transcription factor 12 (Tcf121.8 2.1 
Hemoglobin alpha, adult chain 1 (Hba-a11.7 2.0 
Prion protein (Prnp3.2 3.1 
Homeo box A5 (Hoxa512.1 1.7 
RIKEN cDNA 4732435N03 gene 2.3 1.5 
Hemoglobin alpha, adult chain 1 (Hba-a12.4 2.9 
Homeo box A9 (Hoxa911.3 2.4 
Cysteine-rich secretory protein 1 (Crisp1126.5 −1.6 
Kit oncogene (Kit−2.8 −1.9 
Small muscle protein, X-linked (Smpx−2.4 −2.2 
Aldo-keto reductase family 1, member C18 (Akr1c18−2.8 2.6 
Complement component 3a receptor 1 (C3ar1−1.9 −2.2 
Cytokine-dependent hematopoietic cell linker (Clnk−2.5 −1.7 
Heparan sulfate 6-O-sulfotransferase 2 (Hs6st2−2.3 −1.9 
3'-phosphoadenosine 5'-phosphosulfate synthase 2 (Papss2−2.5 −1.6 
Mast cell protease 1 (Mcpt1−10.4 −4.2 
Reprimo, TP53 dependent G2 arrest mediator candidate (Rprm−1.9 −1.8 
Elastase 2, neutrophil (Ela2−2.4 −1.6 
Mast cell protease 4 (Mcpt4−10.0 −3.1 
Tryptase alpha/beta 1 (Tpsab1−15.4 −2.2 
Heparan sulfate 6-O-sulfotransferase 2 (Hs6st2−4.8 −3.0 
Kit oncogene (Kit−2.5 −1.9 

The cutoff level is 1.5-fold when compared with pMSCV-EGFP–mock infected cells. The full list of genes is provided in Tables S2,S3.

*

P < .05

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