miRNAs predictors of the cytogenetic subgroups in CLL
miRNA . | Prediction analysis of microarray score* . | Chromosome map . | ||||
---|---|---|---|---|---|---|
11q deletion . | 13q deletion . | 17p deletion . | Normal karyotype . | Trisomy 12 . | ||
miR-370 | 0.19 | 0.55 | −1.22 | 0.28 | 0.19 | 14q32.31 |
miR-16-2* | −1.04 | 0.11 | 0.24 | 0.16 | 0.20 | 3q26.1 |
miR-572 | 0.76 | 0.53 | −0.99 | −0.36 | 0.15 | 4p15.33 |
miR-130a* | −0.93 | 0.84 | 0.60 | −0.03 | −0.51 | 11q12.1 |
miR-590-5p | 0.26 | 0.83 | −0.80 | −0.35 | 0.07 | 7q11.23 |
miR-151-3p | −0.40 | 0.31 | −0.82 | 0.35 | 0.35 | 8q24.3 |
miR-640 | −0.51 | 0.68 | 0.41 | 0.32 | −0.70 | 19p13.11 |
miR-548a-3p | 0.62 | −0.03 | −0.20 | −0.26 | 0.00 | 6p22.3 |
miR-556-3p | 0.44 | −0.60 | 0.00 | 0.17 | 0.08 | 8q22.3 |
miR-148a | 0.23 | 0.18 | 0.36 | 0.10 | −0.57 | 1q23.3 |
miR-29b-1* | 0.06 | 0.01 | −0.57 | −0.09 | 0.42 | 7p15.2 |
miR-585 | 0.17 | −0.22 | 0.22 | −0.57 | 0.28 | 7q32.3 |
miR-499-5p | −0.03 | −0.55 | 0.28 | 0.16 | 0.11 | 5q35.1 |
miR-99b | 0.29 | 0.55 | 0.00 | −0.28 | −0.36 | 20q11.22 |
miR-146a | −0.06 | −0.23 | −0.36 | −0.14 | 0.54 | 5q33.3 |
miR-200c | −0.08 | 0.51 | −0.27 | −0.40 | 0.14 | 12p13.31 |
miR-498 | 0.22 | −0.50 | −0.06 | 0.13 | 0.20 | 19q13.41 |
miR-377 | 0.14 | −0.43 | 0.10 | 0.13 | 0.08 | 14q32.31 |
miR-146b-5p | −0.12 | −0.03 | −0.32 | −0.18 | 0.43 | 10q24.32 |
miR-593 | −0.29 | 0.43 | −0.08 | −0.13 | −0.01 | 7q32.1 |
miR-205 | −0.33 | 0.39 | 0.42 | −0.03 | −0.38 | 1q32.2 |
miR-136 | 0.40 | −0.24 | −0.04 | −0.01 | 0.00 | 14q32.31 |
miR-193a-5p | 0.19 | −0.28 | −0.24 | −0.17 | 0.37 | 17q11.2 |
miR-543 | 0.14 | −0.37 | −0.03 | 0.26 | 0.05 | 14q32.31 |
miR-29c | −0.16 | 0.17 | −0.33 | 0.20 | 0.07 | 1q32.2 |
miR-29a* | 0.31 | −0.25 | −0.04 | 0.00 | 0.04 | 7q32.3 |
miR-532-3p | −0.04 | −0.06 | 0.21 | 0.31 | −0.28 | Xp11.23 |
miR-29b | −0.30 | 0.18 | −0.25 | 0.17 | 0.09 | 7q32.3 |
miR-34a | 0.27 | −0.22 | −0.23 | −0.01 | 0.17 | 1p36.23 |
miR-202* | 0.23 | −0.26 | 0.01 | −0.26 | 0.22 | 10q26.3 |
miR-142-5p | −0.22 | 0.24 | 0.13 | 0.02 | −0.16 | 17q22 |
miR-155 | 0.21 | −0.10 | 0.18 | 0.08 | −0.22 | 21q21.3 |
miRNA . | Prediction analysis of microarray score* . | Chromosome map . | ||||
---|---|---|---|---|---|---|
11q deletion . | 13q deletion . | 17p deletion . | Normal karyotype . | Trisomy 12 . | ||
miR-370 | 0.19 | 0.55 | −1.22 | 0.28 | 0.19 | 14q32.31 |
miR-16-2* | −1.04 | 0.11 | 0.24 | 0.16 | 0.20 | 3q26.1 |
miR-572 | 0.76 | 0.53 | −0.99 | −0.36 | 0.15 | 4p15.33 |
miR-130a* | −0.93 | 0.84 | 0.60 | −0.03 | −0.51 | 11q12.1 |
miR-590-5p | 0.26 | 0.83 | −0.80 | −0.35 | 0.07 | 7q11.23 |
miR-151-3p | −0.40 | 0.31 | −0.82 | 0.35 | 0.35 | 8q24.3 |
miR-640 | −0.51 | 0.68 | 0.41 | 0.32 | −0.70 | 19p13.11 |
miR-548a-3p | 0.62 | −0.03 | −0.20 | −0.26 | 0.00 | 6p22.3 |
miR-556-3p | 0.44 | −0.60 | 0.00 | 0.17 | 0.08 | 8q22.3 |
miR-148a | 0.23 | 0.18 | 0.36 | 0.10 | −0.57 | 1q23.3 |
miR-29b-1* | 0.06 | 0.01 | −0.57 | −0.09 | 0.42 | 7p15.2 |
miR-585 | 0.17 | −0.22 | 0.22 | −0.57 | 0.28 | 7q32.3 |
miR-499-5p | −0.03 | −0.55 | 0.28 | 0.16 | 0.11 | 5q35.1 |
miR-99b | 0.29 | 0.55 | 0.00 | −0.28 | −0.36 | 20q11.22 |
miR-146a | −0.06 | −0.23 | −0.36 | −0.14 | 0.54 | 5q33.3 |
miR-200c | −0.08 | 0.51 | −0.27 | −0.40 | 0.14 | 12p13.31 |
miR-498 | 0.22 | −0.50 | −0.06 | 0.13 | 0.20 | 19q13.41 |
miR-377 | 0.14 | −0.43 | 0.10 | 0.13 | 0.08 | 14q32.31 |
miR-146b-5p | −0.12 | −0.03 | −0.32 | −0.18 | 0.43 | 10q24.32 |
miR-593 | −0.29 | 0.43 | −0.08 | −0.13 | −0.01 | 7q32.1 |
miR-205 | −0.33 | 0.39 | 0.42 | −0.03 | −0.38 | 1q32.2 |
miR-136 | 0.40 | −0.24 | −0.04 | −0.01 | 0.00 | 14q32.31 |
miR-193a-5p | 0.19 | −0.28 | −0.24 | −0.17 | 0.37 | 17q11.2 |
miR-543 | 0.14 | −0.37 | −0.03 | 0.26 | 0.05 | 14q32.31 |
miR-29c | −0.16 | 0.17 | −0.33 | 0.20 | 0.07 | 1q32.2 |
miR-29a* | 0.31 | −0.25 | −0.04 | 0.00 | 0.04 | 7q32.3 |
miR-532-3p | −0.04 | −0.06 | 0.21 | 0.31 | −0.28 | Xp11.23 |
miR-29b | −0.30 | 0.18 | −0.25 | 0.17 | 0.09 | 7q32.3 |
miR-34a | 0.27 | −0.22 | −0.23 | −0.01 | 0.17 | 1p36.23 |
miR-202* | 0.23 | −0.26 | 0.01 | −0.26 | 0.22 | 10q26.3 |
miR-142-5p | −0.22 | 0.24 | 0.13 | 0.02 | −0.16 | 17q22 |
miR-155 | 0.21 | −0.10 | 0.18 | 0.08 | −0.22 | 21q21.3 |
CLL indicates chronic lymphocytic leukemia; and miRNA, microRNA.
Log ratio of expression relative to the shrunken centroids.