Expected and observed genotype frequency of genetic variants
| Gene . | Position . | Variant . | P . | Genotype . | Expected frequency, % . | Observed frequency, % . |
|---|---|---|---|---|---|---|
| CCL2 | −2136 | rs1024610 | .49 | A/A | 64.4 | 65.0 |
| A/T | 31.7 | 30.5 | ||||
| T/T | 3.9 | 4.5 | ||||
| CCL2 | −2578 | rs1024611 | .39 | C/C | 50.7 | 51.5 |
| C/T | 41.0 | 39.3 | ||||
| T/T | 8.3 | 9.1 | ||||
| CCR5 | 59029 | rs1799987 | .98 | A/A | 30.5 | 30.4 |
| A/G | 49.4 | 49.7 | ||||
| G/G | 20.0 | 19.9 | ||||
| CCR5 | Δ32 | rs333 | .99 | −/− | 80.3 | 80.4 |
| −/T | 18.6 | 18.5 | ||||
| T/T | 1.1 | 1.1 | ||||
| CCR5 | 59402 | rs1800023 | .95 | A/A | 42.1 | 42.3 |
| A/G | 45.6 | 45.1 | ||||
| G/G | 12.3 | 12.5 | ||||
| CCR5 | 59653 | rs1800024 | .62 | C/C | 82.1 | 82.4 |
| C/T | 17.0 | 16.5 | ||||
| T/T | 0.9 | 1.1 | ||||
| CCL5 | −403 | rs2107538 | .28 | C/C | 65.6 | 66.3 |
| C/T | 30.8 | 29.3 | ||||
| T/T | 3.6 | 4.4 | ||||
| CCL1 | intron | rs2282691 | .99 | A/A | 42.7 | 42.8 |
| A/T | 45.3 | 45.1 | ||||
| T/T | 12.0 | 12.1 | ||||
| CX3CR1 | V249I | rs3732379 | > .99 | C/C | 53.4 | 53.4 |
| C/T | 39.4 | 39.4 | ||||
| T/T | 7.2 | 7.2 | ||||
| CX3CR1 | T280M | rs3732378 | .91 | A/A | 71.3 | 71.5 |
| A/G | 26.3 | 25.9 | ||||
| G/G | 2.4 | 2.6 |
| Gene . | Position . | Variant . | P . | Genotype . | Expected frequency, % . | Observed frequency, % . |
|---|---|---|---|---|---|---|
| CCL2 | −2136 | rs1024610 | .49 | A/A | 64.4 | 65.0 |
| A/T | 31.7 | 30.5 | ||||
| T/T | 3.9 | 4.5 | ||||
| CCL2 | −2578 | rs1024611 | .39 | C/C | 50.7 | 51.5 |
| C/T | 41.0 | 39.3 | ||||
| T/T | 8.3 | 9.1 | ||||
| CCR5 | 59029 | rs1799987 | .98 | A/A | 30.5 | 30.4 |
| A/G | 49.4 | 49.7 | ||||
| G/G | 20.0 | 19.9 | ||||
| CCR5 | Δ32 | rs333 | .99 | −/− | 80.3 | 80.4 |
| −/T | 18.6 | 18.5 | ||||
| T/T | 1.1 | 1.1 | ||||
| CCR5 | 59402 | rs1800023 | .95 | A/A | 42.1 | 42.3 |
| A/G | 45.6 | 45.1 | ||||
| G/G | 12.3 | 12.5 | ||||
| CCR5 | 59653 | rs1800024 | .62 | C/C | 82.1 | 82.4 |
| C/T | 17.0 | 16.5 | ||||
| T/T | 0.9 | 1.1 | ||||
| CCL5 | −403 | rs2107538 | .28 | C/C | 65.6 | 66.3 |
| C/T | 30.8 | 29.3 | ||||
| T/T | 3.6 | 4.4 | ||||
| CCL1 | intron | rs2282691 | .99 | A/A | 42.7 | 42.8 |
| A/T | 45.3 | 45.1 | ||||
| T/T | 12.0 | 12.1 | ||||
| CX3CR1 | V249I | rs3732379 | > .99 | C/C | 53.4 | 53.4 |
| C/T | 39.4 | 39.4 | ||||
| T/T | 7.2 | 7.2 | ||||
| CX3CR1 | T280M | rs3732378 | .91 | A/A | 71.3 | 71.5 |
| A/G | 26.3 | 25.9 | ||||
| G/G | 2.4 | 2.6 |
P indicates the probability of the difference between observed numbers and expected numbers on the basis of Hardy-Weinberg equilibrium frequencies occurring as the result of chance alone.