Table 5

Gene products found in 2 or more pathways significantly affected by the expression of RPS19R62W in basophilic erythroblasts

Gene symbolGene nameRNA level, fold*Function(s)
Wdr33 WD repeat domain 33 ↓1.6 Protein binding, post replication repair 
Txnrd1 Thioredoxin reductase 1 ↓1.6 Oxidative stress response, cell proliferation, amino acid metabolism 
Trp53 Tumor protein p53 ↑1.7 Apoptosis 
Tjp2 Tight junction protein 2 ↑1.55 Intercellular junctions 
Tgfbr2 TGF-β receptor II ↑2.2 Vasculogenesis, embryonic hematopoiesis, inflammation 
Tfrc Transferrin receptor ↓2.1 Cellular iron homeostasis, endocytosis 
Strap Serine/threonine kinase ↑1.6 mRNA processing, RNA splicing 
 receptor associated protein   
Sfrs10 Splicing factor, argenine/serine-rich 10 ↓1.6 mRNA processing, RNA splicing 
Sf3a1 Splicing factor 3a subunit 1 ↑1.8 mRNA processing, RNA splicing, protein modification 
Pmm1 Phosphomannomutase 1 ↑1.9 Metabolism, mannose biosynthesis 
Phlda2 Pleckstrin homology-like domain a2 ↓1.5 Apoptosis, organ morphogenesis 
Pfn1 Profilin 1 ↓2.2 Regulation of RNA pol II transcription, actin binding, cytoskeleton organization 
Pcyt1a Phosphate cytidyltransferase 1, choline-α ↓1.6 Phosphatidylcholine and phospholipid biosynthesis, membrane expansion 
Oat Ornithine aminotransferase NC Neurotransmitter metabolism 
Nfya Nuclear transcription factor Yα ↓2.1 Regulation of RNA pol II transcription 
Myo1c Myosin 1C ↑1.6 Regulation of RNA pol II transcription, transport 
Mknk2 MAP kinase interacting serine/threonine kinase 2 ↓1.6 Regulation of translation, amino acid phosphorylation, stress response 
Kif23 Kinesin family member 23 ↓1.6 Mitosis, cell division 
Itgb4 Integrin β4 ↑1.8 Cell communication/adhesion, integrin signaling 
Hspe1 Heat shock protein 1 ↓1.5 Protein folding, apoptosis 
Hsp27 Heat shock protein 27 NC Apoptosis 
Hnf4a Hepatocyte nuclear factor 4α NC Regulation of RNA pol II transcription, cell 
Hk2 Hexokinase 2 NC Glycolosis, carbohydrate phosphorylation proliferation, metabolism 
Gmfb Glia maturation factor-β ↓1.8 Oxidative stress response, apoptosis 
Gclc Glutamate-cystine ligase NC Oxidative stress response, apoptosis, regulation of RNA pol II transcription 
Eif2s1 Eukaryotic translation initiation factor 2, subunit 1α ↓6.3 Regulation of translation 
Eda Ectodysplasin A ↓1.5 Regulator of NF-κB activity 
Dyrk1a Dual-specificity tyrosine phosphorylation-regulated kinase 1A ↓3.0 Tyrosine, serine/threonine phosphorylation 
Cyb5r3 Cytochrome B5 reductase 3 ↓2.2 Oxidation reduction, cholesterol biosynthesis 
Csh1 Chorionic somatomammotripin NC signal transduction, hormonal activity 
Cd47 CD47 molecule ↑2.0 Cell adhesion, proliferation, regulator of thrombospondin receptor, integrin signaling 
Ccr1 Chemokine receptor 1 ↑2.6 Cell adhesion, chemokine signaling 
Brd2 Bromodomain containing 2 ↑1.5 Serine/threonine kinase, spermatogenesis 
Atpase ATPase ↑1.7 Purine metabolism, cell proliferation 
Atp6v1g1 ATPase, H+ transporting Lysosomal, V1 sububit, G1 ↓1.5 Ion transport, proton transport 
Acaa1b Acetyl-coenzyme A, acetyltransferase 1B ↑2.4 Metabolism 
Acaa2 Acetyl-coenzyme A, acetyltransferase 2 ↓1.6 Metabolism, cholesterol biosynthesis 
Gene symbolGene nameRNA level, fold*Function(s)
Wdr33 WD repeat domain 33 ↓1.6 Protein binding, post replication repair 
Txnrd1 Thioredoxin reductase 1 ↓1.6 Oxidative stress response, cell proliferation, amino acid metabolism 
Trp53 Tumor protein p53 ↑1.7 Apoptosis 
Tjp2 Tight junction protein 2 ↑1.55 Intercellular junctions 
Tgfbr2 TGF-β receptor II ↑2.2 Vasculogenesis, embryonic hematopoiesis, inflammation 
Tfrc Transferrin receptor ↓2.1 Cellular iron homeostasis, endocytosis 
Strap Serine/threonine kinase ↑1.6 mRNA processing, RNA splicing 
 receptor associated protein   
Sfrs10 Splicing factor, argenine/serine-rich 10 ↓1.6 mRNA processing, RNA splicing 
Sf3a1 Splicing factor 3a subunit 1 ↑1.8 mRNA processing, RNA splicing, protein modification 
Pmm1 Phosphomannomutase 1 ↑1.9 Metabolism, mannose biosynthesis 
Phlda2 Pleckstrin homology-like domain a2 ↓1.5 Apoptosis, organ morphogenesis 
Pfn1 Profilin 1 ↓2.2 Regulation of RNA pol II transcription, actin binding, cytoskeleton organization 
Pcyt1a Phosphate cytidyltransferase 1, choline-α ↓1.6 Phosphatidylcholine and phospholipid biosynthesis, membrane expansion 
Oat Ornithine aminotransferase NC Neurotransmitter metabolism 
Nfya Nuclear transcription factor Yα ↓2.1 Regulation of RNA pol II transcription 
Myo1c Myosin 1C ↑1.6 Regulation of RNA pol II transcription, transport 
Mknk2 MAP kinase interacting serine/threonine kinase 2 ↓1.6 Regulation of translation, amino acid phosphorylation, stress response 
Kif23 Kinesin family member 23 ↓1.6 Mitosis, cell division 
Itgb4 Integrin β4 ↑1.8 Cell communication/adhesion, integrin signaling 
Hspe1 Heat shock protein 1 ↓1.5 Protein folding, apoptosis 
Hsp27 Heat shock protein 27 NC Apoptosis 
Hnf4a Hepatocyte nuclear factor 4α NC Regulation of RNA pol II transcription, cell 
Hk2 Hexokinase 2 NC Glycolosis, carbohydrate phosphorylation proliferation, metabolism 
Gmfb Glia maturation factor-β ↓1.8 Oxidative stress response, apoptosis 
Gclc Glutamate-cystine ligase NC Oxidative stress response, apoptosis, regulation of RNA pol II transcription 
Eif2s1 Eukaryotic translation initiation factor 2, subunit 1α ↓6.3 Regulation of translation 
Eda Ectodysplasin A ↓1.5 Regulator of NF-κB activity 
Dyrk1a Dual-specificity tyrosine phosphorylation-regulated kinase 1A ↓3.0 Tyrosine, serine/threonine phosphorylation 
Cyb5r3 Cytochrome B5 reductase 3 ↓2.2 Oxidation reduction, cholesterol biosynthesis 
Csh1 Chorionic somatomammotripin NC signal transduction, hormonal activity 
Cd47 CD47 molecule ↑2.0 Cell adhesion, proliferation, regulator of thrombospondin receptor, integrin signaling 
Ccr1 Chemokine receptor 1 ↑2.6 Cell adhesion, chemokine signaling 
Brd2 Bromodomain containing 2 ↑1.5 Serine/threonine kinase, spermatogenesis 
Atpase ATPase ↑1.7 Purine metabolism, cell proliferation 
Atp6v1g1 ATPase, H+ transporting Lysosomal, V1 sububit, G1 ↓1.5 Ion transport, proton transport 
Acaa1b Acetyl-coenzyme A, acetyltransferase 1B ↑2.4 Metabolism 
Acaa2 Acetyl-coenzyme A, acetyltransferase 2 ↓1.6 Metabolism, cholesterol biosynthesis 

NC indicates no significant change in mRNA levels, gene product imported with significantly affected pathway.

*

Significant change (P < .03) in mRNA levels.

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