Table 2

Degree of variation in β3 βI-hybrid domain orientation among β3 integrin structures

αIIbβ3closed headpiece*αIIbβ3 ectodomain (3FCS)*αVβ3 ectodomain (3IJE)αVβ3 liganded ectodomain (1L5G)αIIbβ3 open headpiece
αIIbβ3 closed headpiece* 3.0° 12.6°-13.3° 11.5°-13.5° 13.9°-15.9° 51.3°-62.3° 
αIIbβ3 ectodomain (3FCS)* — 0.2° 7.4°-7.4° 8.2°-8.3° 57.9°-69.7° 
αVβ3 ectodomain (3IJE) — — — 1.9° 55.1°-66.3° 
αVβ3 liganded ectodomain (1L5G) — — — — 55.5°-66.6° 
αIIbβ3 open headpiece — — — — 1.2°-12.3° 
αIIbβ3closed headpiece*αIIbβ3 ectodomain (3FCS)*αVβ3 ectodomain (3IJE)αVβ3 liganded ectodomain (1L5G)αIIbβ3 open headpiece
αIIbβ3 closed headpiece* 3.0° 12.6°-13.3° 11.5°-13.5° 13.9°-15.9° 51.3°-62.3° 
αIIbβ3 ectodomain (3FCS)* — 0.2° 7.4°-7.4° 8.2°-8.3° 57.9°-69.7° 
αVβ3 ectodomain (3IJE) — — — 1.9° 55.1°-66.3° 
αVβ3 liganded ectodomain (1L5G) — — — — 55.5°-66.6° 
αIIbβ3 open headpiece — — — — 1.2°-12.3° 

Each pair of domains from 2 molecules was superposed using the β3 βI domain, and the change in angle upon superimposing the β3 hybrid domain was calculated.

— indicates duplicates or no comparison possible because only one structure is available.

*

Two molecules in current αIIbβ3 closed headpiece structure and 2 molecules in Protein Data Bank (PDB) code 3FCS.

One molecule in Protein Data Bank 3IJE and one molecule in PDB 1L5G.

One molecule in Protein Data Bank 2VDR and three molecules in PDB 3FCU.

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