Table 1 Top 30 HIF-1 binding sites HIF-1... | American Society of Hematology

Table 1

Top 30 HIF-1 binding sites

HIF-1 binding sites	Chromosome	Start	End	Peak height, no. of reads per window	Covered by human promoter 1.0R array	Nearest gene locus	RefSeq number
1	7	156986147	156987039	314	No	DNAJB6	NM_058246
2	8	134456859	134457261	180	No	NDRG1	NM_006096
3	1	114156539	114157002	288	Yes	RSBN1	NM_018364
4	16	29984123	29984574	160	Yes	ALDOA	NM_184041
5	15	91153222	91153655	160	No	CHD2	NM_001042572
6	20	48720371	48720786	136	No	C20orf175	NM_080829
7	3	5003621	5003966	128	No	BHLHB2	NM_003670
8	14	61287408	61287886	126	No	SNAPC1	NM_003082
9	10	6283489	6283830	126	Yes	PFKFB3	NM_004566
10	19	39541937	39542408	123	Yes	GPI	NM_000175
11	1	178403857	178404013	118	Yes	QSCN6	NM_002826
12	15	70306014	70306475	116	No	PKM2	NM_002654
13	6	87921667	87922197	109	Yes	CGA	NM_000735
14	14	74791306	74791781	103	No	FOS	NM_005252
15	14	22840340	22840855	102	Yes	BCL2L2	NM_004050
16	14	33477245	33477551	98	No	EGLN3	NM_022073
17	6	43743806	43744203	96	No	MRPS18A	NM_018135
18	12	8014473	8014830	95	No	SLC2A3	NM_006931
19	3	48569558	48569870	95	Yes	PFKFB4	NM_004567
20	7	55216284	55216762	94	No	EGFR	NM_201283
21	2	173128811	173129189	94	Yes	PDK1	NM_002610
22	4	186554370	186554738	89	Yes	ANKRD37	NM_181726
23	3	123585527	123585631	88	Yes	C3orf28	NM_014367
24	8	135913721	135913971	87	No	ZFAT1	NM_020863
25	1	8861349	8862115	86	Yes	ENO1	NM_001428
26	17	78009247	78009655	86	Yes	NARF	NM_001038618
27	1	200320766	200321048	83	No	GPR37L1	NM_004767
28	2	86521270	86521896	81	Yes	JMJD1A	NM_018433
29	15	88509909	88510331	81	No	SEMA4B	NM_020210
30	4	120441100	120441561	87	Yes	LOC401152	NM_001001701

HIF-1 binding sites	Chromosome	Start	End	Peak height, no. of reads per window	Covered by human promoter 1.0R array	Nearest gene locus	RefSeq number
1	7	156986147	156987039	314	No	DNAJB6	NM_058246
2	8	134456859	134457261	180	No	NDRG1	NM_006096
3	1	114156539	114157002	288	Yes	RSBN1	NM_018364
4	16	29984123	29984574	160	Yes	ALDOA	NM_184041
5	15	91153222	91153655	160	No	CHD2	NM_001042572
6	20	48720371	48720786	136	No	C20orf175	NM_080829
7	3	5003621	5003966	128	No	BHLHB2	NM_003670
8	14	61287408	61287886	126	No	SNAPC1	NM_003082
9	10	6283489	6283830	126	Yes	PFKFB3	NM_004566
10	19	39541937	39542408	123	Yes	GPI	NM_000175
11	1	178403857	178404013	118	Yes	QSCN6	NM_002826
12	15	70306014	70306475	116	No	PKM2	NM_002654
13	6	87921667	87922197	109	Yes	CGA	NM_000735
14	14	74791306	74791781	103	No	FOS	NM_005252
15	14	22840340	22840855	102	Yes	BCL2L2	NM_004050
16	14	33477245	33477551	98	No	EGLN3	NM_022073
17	6	43743806	43744203	96	No	MRPS18A	NM_018135
18	12	8014473	8014830	95	No	SLC2A3	NM_006931
19	3	48569558	48569870	95	Yes	PFKFB4	NM_004567
20	7	55216284	55216762	94	No	EGFR	NM_201283
21	2	173128811	173129189	94	Yes	PDK1	NM_002610
22	4	186554370	186554738	89	Yes	ANKRD37	NM_181726
23	3	123585527	123585631	88	Yes	C3orf28	NM_014367
24	8	135913721	135913971	87	No	ZFAT1	NM_020863
25	1	8861349	8862115	86	Yes	ENO1	NM_001428
26	17	78009247	78009655	86	Yes	NARF	NM_001038618
27	1	200320766	200321048	83	No	GPR37L1	NM_004767
28	2	86521270	86521896	81	Yes	JMJD1A	NM_018433
29	15	88509909	88510331	81	No	SEMA4B	NM_020210
30	4	120441100	120441561	87	Yes	LOC401152	NM_001001701

HIF indicates hypoxia-inducible factor.