Table 2

Probe sets already associated with B and T leukemias

Probe set IDsT1-CT*T2-CT*T3-CT*B1-CT†B2-CT†B3-CT†Gene titleGene symbol
Down-regulated B leukemia probe sets 
1422122_at 0.21 0.06 0.43 −6.57 −6.89 −6.36 Fc receptor, IgE, low affinity II, α polypeptide Fcer2a 
1451713_a_at −0.05 −0.09 0.18 −6.26 −5.85 −5.85 Fc receptor, IgE, low affinity II, α polypeptide Fcer2a 
1438030_at −0.28 −0.01 0.06 −5.23 −4.94 −4.27 RAS, guanyl releasing protein 3 Rasgrp3 
1447998_at 0.36 0.14 0.31 −4.87 −4.53 −4.84 Immunoglobulin heavy chain 4 (serum IgG1) Igh-4 
1427292_at −0.31 −0.37 0.00 −4.47 −2.90 −3.62 Immunoglobulin λ chain, variable 1 Igl-V1 
1439221_s_at −0.18 −0.15 0.00 −4.44 −4.21 −4.85 Tumor necrosis factor receptor superfamily, member 5 Tnfrsf5 
1443783_x_at 0.01 −0.01 −0.16 −4.17 −4.56 −4.67 Histocompatibility 2, class II antigen A, α H2-Aa 
1452521_a_at −0.01 −0.54 −0.20 −3.98 −3.90 −4.23 Urokinase plasminogen activator receptor Plaur 
1449473_s_at −0.53 −0.40 −0.27 −3.85 −3.90 −4.69 Tumor necrosis factor receptor superfamily, member 5 Tnfrsf5 
1427306_at 0.27 −0.08 0.23 −3.50 −3.45 −3.65 Ryanodine receptor 1, skeletal muscle Ryr1 
1438031_at −0.41 −0.10 −0.06 −3.49 −3.74 −3.67 RAS, guanyl releasing protein 3 Rasgrp3 
1442263_at −0.15 −0.27 −0.25 −3.48 −3.56 −3.09 Regulator of G-protein signaling 13 Rgs13 
1419609_at −0.32 −0.15 −0.34 −3.45 −3.90 −3.75 Chemokine (C-C motif) receptor 1 Ccr1 
1416055_at −0.04 −0.08 0.15 −3.43 −3.38 −3.29 Amylase 2, pancreatic Amy2 
1442544_at −0.01 −0.06 0.47 −3.31 −3.53 −3.27 Immunoglobulin heavy chain 4 (serum IgG1) Igh-4 
1451965_at −0.56 −0.42 −0.44 −3.22 −3.69 −3.67 Immunoglobulin κ chain complex Igk 
1425063_at −0.07 −0.29 −0.02 −3.15 −2.98 −2.85 Fc receptor-like 1 Fcrl1 
1448861_at 0.50 −0.13 0.51 −3.15 −3.18 −3.30 Tnf receptor-associated factor 5 Traf5 
1425902_a_at −0.16 −0.41 −0.48 −2.84 −2.54 −2.90 Nuclear factor of κ light polypeptide gene enhancer in B cells 2, p49/p100 Nfkb2 
1425289_a_at −0.10 0.15 0.58 −2.82 −3.56 −4.96 Complement receptor 2 Cr2 
1420710_at −0.05 0.37 −0.40 −2.70 −2.12 −2.23 Reticuloendotheliosis oncogene Rel 
1427576_at −0.52 −0.50 −0.23 −2.60 −3.04 −3.10 Immunoglobulin κ chain, constant region Igk-C 
1450912_at −0.16 −0.23 0.11 −2.49 −2.19 −3.14 Membrane-spanning 4-domains, subfamily A, member 1 Ms4a1 
1423226_at −0.03 0.32 0.48 −2.32 −2.03 −2.79 Membrane-spanning 4-domains, subfamily A, member 1 Ms4a1 
1455019_x_at −0.30 −0.48 0.10 −2.43 −2.68 −2.52 Cytoskeleton-associated protein 4 Ckap4 
1421211_a_at −0.38 −0.14 −0.41 −2.37 −3.83 −3.85 Class II transactivator C2ta 
1420353_at −0.36 −0.57 −0.53 −2.36 −3.66 −3.51 Lymphotoxin A Lta 
1422828_at −0.29 −0.29 −0.43 −2.31 −2.09 −2.21 CD3 antigen, δ polypeptide Cd3d 
1415899_at −0.54 −0.24 −0.57 −2.15 −2.50 −3.38 Jun-B oncogene Junb 
1419714_at 0.42 −0.06 0.29 −2.11 −2.27 −2.06 Programmed cell death 1 ligand 1 Pdcd1lg1 
1447839_x_at 0.56 0.55 0.08 −2.08 −2.23 −2.22 Adrenomedullin Adm 
1425802_a_at −0.26 0.23 −0.06 −2.07 −2.25 −4.45 Fc receptor-like A Fcrla 
Up-regulated B leukemia probe sets 
1427276_at 0.20 0.39 0.50 2.03 2.63 2.12 SMC4 structural maintenance of chromosomes 4-like 1 (yeast) Smc4l1 
1452499_a_at 0.48 0.09 0.16 2.03 2.17 2.34 Kinesin family member 2A Kif2a 
1436036_at 0.40 0.10 0.08 2.08 2.53 2.79 Wolf-Hirschhorn syndrome candidate 1 (human) Whsc1 
1439740_s_at 0.20 −0.01 0.14 2.09 2.62 2.16 Uridine-cytidine kinase 2 Uck2 
1448531_at 0.39 0.45 0.36 2.19 2.39 2.27 Lamin B2 Lmnb2 
1417299_at −0.24 −0.31 0.23 2.38 2.94 2.50 NIMA (never in mitosis gene a)-related expressed kinase 2 Nek2 
1420909_at 0.20 0.21 −0.01 2.40 3.59 3.57 Vascular endothelial growth factor A Vegfa 
1428853_at 0.37 −0.09 −0.25 2.50 3.08 3.26 Patched homolog 1 Ptch1 
1437716_x_at −0.18 −0.27 −0.08 2.54 2.94 2.43 Kinesin family member 22 Kif22 
1418969_at 0.11 −0.11 −0.05 2.57 3.04 2.53 S-phase kinase-associated protein 2 (p45) Skp2 
1415849_s_at −0.30 −0.53 −0.46 2.61 3.02 2.97 Stathmin 1 Stmn1 
1449293_a_at −0.01 −0.43 −0.22 2.72 2.87 2.65 S-phase kinase-associated protein 2 (p45) Skp2 
1423092_at −0.27 −0.57 0.49 2.74 3.13 3.10 Inner centromere protein Incenp 
1444031_at 0.50 0.17 0.02 2.76 3.05 2.34 Calcium/calmodulin-dependent protein kinase II, δ Camk2d 
1417656_at 0.29 −0.06 0.51 2.77 2.90 2.52 Myeloblastosis oncogene-like 2 Mybl2 
1417694_at −0.20 −0.39 −0.19 2.81 2.83 4.08 Growth factor receptor bound protein 2-associated protein 1 Gab1 
1439436_x_at −0.01 −0.44 0.18 2.83 3.38 3.08 Inner centromere protein Incenp 
1424128_x_at −0.30 −0.55 0.48 2.84 3.32 3.16 Aurora kinase B Aurkb 
1446669_at 0.30 0.45 0.18 2.92 2.95 2.14 Early B-cell factor 1 Ebf1 
1440244_at 0.00 0.19 0.05 2.99 4.55 5.28 Avian erythroblastosis virus E-26 (v-ets) oncogene related Erg 
1424278_a_at −0.54 −0.46 −0.47 3.09 3.58 3.10 Baculoviral IAP repeat-containing 5 Birc5 
1460247_a_at 0.09 −0.12 −0.29 3.21 3.47 3.31 S-phase kinase-associated protein 2 (p45) Skp2 
1437580_s_at −0.44 −0.56 −0.10 3.23 3.47 3.29 NIMA (never in mitosis gene a)-related expressed kinase 2 Nek2 
1458447_at 0.49 0.43 0.52 3.50 4.00 3.67 Centromere protein F Cenpf 
1415810_at −0.19 −0.39 −0.35 3.50 3.56 3.55 Ubiquitin-like, containing PHD and RING finger domains, 1 Uhrf1 
1419943_s_at −0.50 −0.52 −0.03 3.50 4.23 3.84 Cyclin B1 Ccnb1 
1416961_at −0.11 −0.12 0.34 3.56 4.14 3.69 Budding uninhibited by benzimidazoles 1 homolog, β (Saccharomyces cerevisiae) Bub1b 
1424991_s_at −0.03 −0.04 0.42 3.64 3.98 4.10 Thymidylate synthase Tyms 
1417938_at −0.03 −0.02 0.37 3.75 4.19 3.88 RAD51-associated protein 1 Rad51ap1 
1448899_s_at −0.38 −0.31 0.24 3.76 4.13 3.84 RAD51-associated protein 1 Rad51ap1 
1416155_at 0.32 0.19 0.26 3.78 4.30 4.38 High mobility group box 3 Hmgb3 
1415811_at 0.37 −0.03 −0.11 3.91 3.95 3.94 Ubiquitin-like, containing PHD and RING finger domains, 1 Uhrf1 
1418264_at −0.04 −0.39 0.35 4.16 4.52 4.55 SoxLZ/Sox6 leucine zipper binding protein in testis Solt 
1417910_at −0.57 −0.47 −0.32 4.25 4.71 4.28 Cyclin A2 Ccna2 
1434748_at −0.27 −0.36 −0.21 4.30 4.78 4.21 Cytoskeleton-associated protein 2 Ckap2 
1448205_at −0.15 −0.23 0.15 4.42 4.85 4.49 Cyclin B1, related sequence 1 /// cyclin B1 Ccnb1-rs1///Ccnb1 
1416076_at −0.53 −0.45 −0.19 4.47 5.18 4.81 Cyclin B1 Ccnb1 
1452315_at 0.05 0.27 0.57 4.48 4.82 4.58 Kinesin family member 11 Kif11 
1439820_at −0.08 −0.09 −0.13 4.48 4.48 3.95 Early B-cell factor 1 Ebf1 
1424046_at −0.04 −0.02 −0.03 4.56 5.27 4.79 Budding uninhibited by benzimidazoles 1 homolog (Saccharomyces cerevisiae) Bub1 
1452314_at −0.14 −0.18 0.10 4.58 5.06 4.63 Kinesin family member 11 Kif11 
1454694_a_at −0.13 −0.08 0.03 4.66 5.14 4.87 Topoisomerase (DNA) II α Top2a 
1418507_s_at −0.26 0.01 −0.06 4.88 5.92 4.41 RIKEN cDNA D130043N08 gene D130043N08Rik 
1447363_s_at −0.23 −0.28 0.10 4.97 5.50 5.14 Budding uninhibited by benzimidazoles 1 homolog, β (Saccharomyces cerevisiae) Bub1b 
1435306_a_at −0.20 −0.32 0.22 5.05 5.50 5.04 Kinesin family member 11 Kif11 
1424967_x_at −0.06 0.08 0.27 5.23 3.63 2.48 Troponin T2, cardiac Tnnt2 
1418726_a_at 0.29 0.11 0.20 5.49 4.30 3.17 Troponin T2, cardiac Tnnt2 
1427161_at 0.31 0.43 0.28 5.67 6.30 5.92 Centromere autoantigen F Cenpf 
1426817_at 0.25 0.39 0.41 5.64 6.09 5.88 Antigen identified by monoclonal antibody Ki 67 Mki67 
1420176_x_at −0.27 0.14 −0.04 7.08 7.05 7.00 Immunoglobulin λ-like polypeptide 1 Igll1 
1448649_at −0.02 −0.24 −0.17 9.58 9.56 9.18 Glutamyl aminopeptidase Enpep 
Down-regulated T leukemia probe sets 
1427419_x_at −2.15 −8.36 −8.79 −0.26 −0.06 −0.26 Chemokine (C-C motif) receptor 9 Ccr9 
1421919_a_at −2.68 −6.65 −6.65 0.03 −0.06 −0.30 Chemokine (C-C motif) receptor 9 Ccr9 
1425792_a_at −2.79 −3.33 −5.75 −0.18 −0.26 −0.30 RAR-related orphan receptor gamma Rorc 
1423954_at −3.21 −2.52 −3.89 0.26 0.13 −0.24 Complement component 3 C3 
1447541_s_at −2.12 −2.46 −2.49 −0.53 −0.33 −0.30 Integrin, α E, epithelial-associated Itgae 
1450295_s_at −2.23 −2.13 −2.88 0.11 0.36 0.13 Poliovirus receptor /// DNA segment, Chr 7, ERATO Doi 458, expressed Pvr /// D7Ertd458e 
1427411_s_at −2.60 −2.07 −2.24 −0.33 −0.31 0.06 Deleted in lymphocytic leukemia, 2 Dleu2 
1420413_at −2.30 −2.07 −2.06 0.42 0.29 0.50 Aolute carrier family 7 (cationic amino acid transporter, y+ system), member 11 Slc7a11 
Up-regulated T leukemia probe sets 
1449835_at 2.55 2.86 5.05 −0.30 −0.38 −0.35 Programmed cell death 1 Pdcd1 
Down-regulated B and T leukemia common probe sets 
1427127_x_at −6.03 −4.87 −2.83 −5.10 −5.83 −5.70 Heat shock protein 1B /// heat shock protein 1A Hspa1b /// Hspa1a 
1452318_a_at −5.74 −4.92 −3.09 −4.73 −5.26 −5.81 Heat shock protein 1B Hspa1b 
1427126_at −5.23 −4.56 −2.76 −4.92 −5.53 −5.75 Heat shock protein 1B Hspa1b 
1448123_s_at −3.86 −3.54 −3.37 −2.85 −2.70 −2.36 Transforming growth factor, β induced Tgfbi 
1448162_at −3.84 −3.92 −3.30 −4.15 −3.86 −4.01 Vascular cell adhesion molecule 1 Vcam1 
1456250_x_at −3.57 −3.18 −3.79 −2.29 −2.18 −2.24 Transforming growth factor, β induced Tgfbi 
1460423_x_at −3.39 −2.89 −2.13 −6.19 −6.45 −7.35 Ig κ chain IgM 
1418126_at −2.89 −2.92 −2.91 −2.02 −2.34 −2.80 Chemokine (C-C motif) ligand 5 Ccl5 
1417756_a_at −2.84 −5.14 −3.04 −2.50 −3.17 −2.19 Lymphocyte specific 1 Lsp1 
1449858_at −2.83 −2.82 −2.50 −4.78 −4.68 −2.89 CD86 antigen Cd86 
1449164_at −2.76 −3.00 −3.03 −2.83 −2.94 −2.67 CD68 antigen Cd68 
1418365_at −2.71 −3.02 −2.34 −4.61 −4.43 −5.66 Cathepsin H Ctsh 
1415989_at −2.46 −2.50 −2.69 −2.07 −2.32 −2.37 Vascular cell adhesion molecule 1 Vcam1 
1434499_a_at −2.44 −2.70 −6.15 −2.72 −2.91 −2.62 Lactate dehydrogenase 2, B chain Ldh2 
1448237_x_at −2.43 −2.82 −5.89 −2.01 −2.07 −2.07 Lactate dehydrogenase 2, B chain Ldh2 
1450381_a_at −2.23 −3.10 −2.91 −2.74 −3.38 −3.19 B-cell leukemia/lymphoma 6 Bcl6 
1450381_a_at −2.23 −3.10 −2.91 −2.74 −3.38 −3.19 B-cell leukemia/lymphoma 6 Bcl6 
Up-regulated B and T leukemia common probe sets 
1422967_a_at 2.03 2.96 2.87 2.32 3.45 2.72 Transferrin receptor Tfrc 
1422198_a_at 2.03 2.21 2.54 2.39 3.05 2.17 Serine hydroxymethyl transferase 1 (soluble) Shmt1 
1425179_at 2.15 2.31 2.71 2.80 3.32 2.52 Serine hydroxymethyl transferase 1 (soluble) Shmt1 
1425923_at 6.04 5.92 5.57 4.66 4.87 4.19 v-myc myelocytomatosis viral-related oncogene, neuroblastoma derived (avian) Mycn 
Probe set IDsT1-CT*T2-CT*T3-CT*B1-CT†B2-CT†B3-CT†Gene titleGene symbol
Down-regulated B leukemia probe sets 
1422122_at 0.21 0.06 0.43 −6.57 −6.89 −6.36 Fc receptor, IgE, low affinity II, α polypeptide Fcer2a 
1451713_a_at −0.05 −0.09 0.18 −6.26 −5.85 −5.85 Fc receptor, IgE, low affinity II, α polypeptide Fcer2a 
1438030_at −0.28 −0.01 0.06 −5.23 −4.94 −4.27 RAS, guanyl releasing protein 3 Rasgrp3 
1447998_at 0.36 0.14 0.31 −4.87 −4.53 −4.84 Immunoglobulin heavy chain 4 (serum IgG1) Igh-4 
1427292_at −0.31 −0.37 0.00 −4.47 −2.90 −3.62 Immunoglobulin λ chain, variable 1 Igl-V1 
1439221_s_at −0.18 −0.15 0.00 −4.44 −4.21 −4.85 Tumor necrosis factor receptor superfamily, member 5 Tnfrsf5 
1443783_x_at 0.01 −0.01 −0.16 −4.17 −4.56 −4.67 Histocompatibility 2, class II antigen A, α H2-Aa 
1452521_a_at −0.01 −0.54 −0.20 −3.98 −3.90 −4.23 Urokinase plasminogen activator receptor Plaur 
1449473_s_at −0.53 −0.40 −0.27 −3.85 −3.90 −4.69 Tumor necrosis factor receptor superfamily, member 5 Tnfrsf5 
1427306_at 0.27 −0.08 0.23 −3.50 −3.45 −3.65 Ryanodine receptor 1, skeletal muscle Ryr1 
1438031_at −0.41 −0.10 −0.06 −3.49 −3.74 −3.67 RAS, guanyl releasing protein 3 Rasgrp3 
1442263_at −0.15 −0.27 −0.25 −3.48 −3.56 −3.09 Regulator of G-protein signaling 13 Rgs13 
1419609_at −0.32 −0.15 −0.34 −3.45 −3.90 −3.75 Chemokine (C-C motif) receptor 1 Ccr1 
1416055_at −0.04 −0.08 0.15 −3.43 −3.38 −3.29 Amylase 2, pancreatic Amy2 
1442544_at −0.01 −0.06 0.47 −3.31 −3.53 −3.27 Immunoglobulin heavy chain 4 (serum IgG1) Igh-4 
1451965_at −0.56 −0.42 −0.44 −3.22 −3.69 −3.67 Immunoglobulin κ chain complex Igk 
1425063_at −0.07 −0.29 −0.02 −3.15 −2.98 −2.85 Fc receptor-like 1 Fcrl1 
1448861_at 0.50 −0.13 0.51 −3.15 −3.18 −3.30 Tnf receptor-associated factor 5 Traf5 
1425902_a_at −0.16 −0.41 −0.48 −2.84 −2.54 −2.90 Nuclear factor of κ light polypeptide gene enhancer in B cells 2, p49/p100 Nfkb2 
1425289_a_at −0.10 0.15 0.58 −2.82 −3.56 −4.96 Complement receptor 2 Cr2 
1420710_at −0.05 0.37 −0.40 −2.70 −2.12 −2.23 Reticuloendotheliosis oncogene Rel 
1427576_at −0.52 −0.50 −0.23 −2.60 −3.04 −3.10 Immunoglobulin κ chain, constant region Igk-C 
1450912_at −0.16 −0.23 0.11 −2.49 −2.19 −3.14 Membrane-spanning 4-domains, subfamily A, member 1 Ms4a1 
1423226_at −0.03 0.32 0.48 −2.32 −2.03 −2.79 Membrane-spanning 4-domains, subfamily A, member 1 Ms4a1 
1455019_x_at −0.30 −0.48 0.10 −2.43 −2.68 −2.52 Cytoskeleton-associated protein 4 Ckap4 
1421211_a_at −0.38 −0.14 −0.41 −2.37 −3.83 −3.85 Class II transactivator C2ta 
1420353_at −0.36 −0.57 −0.53 −2.36 −3.66 −3.51 Lymphotoxin A Lta 
1422828_at −0.29 −0.29 −0.43 −2.31 −2.09 −2.21 CD3 antigen, δ polypeptide Cd3d 
1415899_at −0.54 −0.24 −0.57 −2.15 −2.50 −3.38 Jun-B oncogene Junb 
1419714_at 0.42 −0.06 0.29 −2.11 −2.27 −2.06 Programmed cell death 1 ligand 1 Pdcd1lg1 
1447839_x_at 0.56 0.55 0.08 −2.08 −2.23 −2.22 Adrenomedullin Adm 
1425802_a_at −0.26 0.23 −0.06 −2.07 −2.25 −4.45 Fc receptor-like A Fcrla 
Up-regulated B leukemia probe sets 
1427276_at 0.20 0.39 0.50 2.03 2.63 2.12 SMC4 structural maintenance of chromosomes 4-like 1 (yeast) Smc4l1 
1452499_a_at 0.48 0.09 0.16 2.03 2.17 2.34 Kinesin family member 2A Kif2a 
1436036_at 0.40 0.10 0.08 2.08 2.53 2.79 Wolf-Hirschhorn syndrome candidate 1 (human) Whsc1 
1439740_s_at 0.20 −0.01 0.14 2.09 2.62 2.16 Uridine-cytidine kinase 2 Uck2 
1448531_at 0.39 0.45 0.36 2.19 2.39 2.27 Lamin B2 Lmnb2 
1417299_at −0.24 −0.31 0.23 2.38 2.94 2.50 NIMA (never in mitosis gene a)-related expressed kinase 2 Nek2 
1420909_at 0.20 0.21 −0.01 2.40 3.59 3.57 Vascular endothelial growth factor A Vegfa 
1428853_at 0.37 −0.09 −0.25 2.50 3.08 3.26 Patched homolog 1 Ptch1 
1437716_x_at −0.18 −0.27 −0.08 2.54 2.94 2.43 Kinesin family member 22 Kif22 
1418969_at 0.11 −0.11 −0.05 2.57 3.04 2.53 S-phase kinase-associated protein 2 (p45) Skp2 
1415849_s_at −0.30 −0.53 −0.46 2.61 3.02 2.97 Stathmin 1 Stmn1 
1449293_a_at −0.01 −0.43 −0.22 2.72 2.87 2.65 S-phase kinase-associated protein 2 (p45) Skp2 
1423092_at −0.27 −0.57 0.49 2.74 3.13 3.10 Inner centromere protein Incenp 
1444031_at 0.50 0.17 0.02 2.76 3.05 2.34 Calcium/calmodulin-dependent protein kinase II, δ Camk2d 
1417656_at 0.29 −0.06 0.51 2.77 2.90 2.52 Myeloblastosis oncogene-like 2 Mybl2 
1417694_at −0.20 −0.39 −0.19 2.81 2.83 4.08 Growth factor receptor bound protein 2-associated protein 1 Gab1 
1439436_x_at −0.01 −0.44 0.18 2.83 3.38 3.08 Inner centromere protein Incenp 
1424128_x_at −0.30 −0.55 0.48 2.84 3.32 3.16 Aurora kinase B Aurkb 
1446669_at 0.30 0.45 0.18 2.92 2.95 2.14 Early B-cell factor 1 Ebf1 
1440244_at 0.00 0.19 0.05 2.99 4.55 5.28 Avian erythroblastosis virus E-26 (v-ets) oncogene related Erg 
1424278_a_at −0.54 −0.46 −0.47 3.09 3.58 3.10 Baculoviral IAP repeat-containing 5 Birc5 
1460247_a_at 0.09 −0.12 −0.29 3.21 3.47 3.31 S-phase kinase-associated protein 2 (p45) Skp2 
1437580_s_at −0.44 −0.56 −0.10 3.23 3.47 3.29 NIMA (never in mitosis gene a)-related expressed kinase 2 Nek2 
1458447_at 0.49 0.43 0.52 3.50 4.00 3.67 Centromere protein F Cenpf 
1415810_at −0.19 −0.39 −0.35 3.50 3.56 3.55 Ubiquitin-like, containing PHD and RING finger domains, 1 Uhrf1 
1419943_s_at −0.50 −0.52 −0.03 3.50 4.23 3.84 Cyclin B1 Ccnb1 
1416961_at −0.11 −0.12 0.34 3.56 4.14 3.69 Budding uninhibited by benzimidazoles 1 homolog, β (Saccharomyces cerevisiae) Bub1b 
1424991_s_at −0.03 −0.04 0.42 3.64 3.98 4.10 Thymidylate synthase Tyms 
1417938_at −0.03 −0.02 0.37 3.75 4.19 3.88 RAD51-associated protein 1 Rad51ap1 
1448899_s_at −0.38 −0.31 0.24 3.76 4.13 3.84 RAD51-associated protein 1 Rad51ap1 
1416155_at 0.32 0.19 0.26 3.78 4.30 4.38 High mobility group box 3 Hmgb3 
1415811_at 0.37 −0.03 −0.11 3.91 3.95 3.94 Ubiquitin-like, containing PHD and RING finger domains, 1 Uhrf1 
1418264_at −0.04 −0.39 0.35 4.16 4.52 4.55 SoxLZ/Sox6 leucine zipper binding protein in testis Solt 
1417910_at −0.57 −0.47 −0.32 4.25 4.71 4.28 Cyclin A2 Ccna2 
1434748_at −0.27 −0.36 −0.21 4.30 4.78 4.21 Cytoskeleton-associated protein 2 Ckap2 
1448205_at −0.15 −0.23 0.15 4.42 4.85 4.49 Cyclin B1, related sequence 1 /// cyclin B1 Ccnb1-rs1///Ccnb1 
1416076_at −0.53 −0.45 −0.19 4.47 5.18 4.81 Cyclin B1 Ccnb1 
1452315_at 0.05 0.27 0.57 4.48 4.82 4.58 Kinesin family member 11 Kif11 
1439820_at −0.08 −0.09 −0.13 4.48 4.48 3.95 Early B-cell factor 1 Ebf1 
1424046_at −0.04 −0.02 −0.03 4.56 5.27 4.79 Budding uninhibited by benzimidazoles 1 homolog (Saccharomyces cerevisiae) Bub1 
1452314_at −0.14 −0.18 0.10 4.58 5.06 4.63 Kinesin family member 11 Kif11 
1454694_a_at −0.13 −0.08 0.03 4.66 5.14 4.87 Topoisomerase (DNA) II α Top2a 
1418507_s_at −0.26 0.01 −0.06 4.88 5.92 4.41 RIKEN cDNA D130043N08 gene D130043N08Rik 
1447363_s_at −0.23 −0.28 0.10 4.97 5.50 5.14 Budding uninhibited by benzimidazoles 1 homolog, β (Saccharomyces cerevisiae) Bub1b 
1435306_a_at −0.20 −0.32 0.22 5.05 5.50 5.04 Kinesin family member 11 Kif11 
1424967_x_at −0.06 0.08 0.27 5.23 3.63 2.48 Troponin T2, cardiac Tnnt2 
1418726_a_at 0.29 0.11 0.20 5.49 4.30 3.17 Troponin T2, cardiac Tnnt2 
1427161_at 0.31 0.43 0.28 5.67 6.30 5.92 Centromere autoantigen F Cenpf 
1426817_at 0.25 0.39 0.41 5.64 6.09 5.88 Antigen identified by monoclonal antibody Ki 67 Mki67 
1420176_x_at −0.27 0.14 −0.04 7.08 7.05 7.00 Immunoglobulin λ-like polypeptide 1 Igll1 
1448649_at −0.02 −0.24 −0.17 9.58 9.56 9.18 Glutamyl aminopeptidase Enpep 
Down-regulated T leukemia probe sets 
1427419_x_at −2.15 −8.36 −8.79 −0.26 −0.06 −0.26 Chemokine (C-C motif) receptor 9 Ccr9 
1421919_a_at −2.68 −6.65 −6.65 0.03 −0.06 −0.30 Chemokine (C-C motif) receptor 9 Ccr9 
1425792_a_at −2.79 −3.33 −5.75 −0.18 −0.26 −0.30 RAR-related orphan receptor gamma Rorc 
1423954_at −3.21 −2.52 −3.89 0.26 0.13 −0.24 Complement component 3 C3 
1447541_s_at −2.12 −2.46 −2.49 −0.53 −0.33 −0.30 Integrin, α E, epithelial-associated Itgae 
1450295_s_at −2.23 −2.13 −2.88 0.11 0.36 0.13 Poliovirus receptor /// DNA segment, Chr 7, ERATO Doi 458, expressed Pvr /// D7Ertd458e 
1427411_s_at −2.60 −2.07 −2.24 −0.33 −0.31 0.06 Deleted in lymphocytic leukemia, 2 Dleu2 
1420413_at −2.30 −2.07 −2.06 0.42 0.29 0.50 Aolute carrier family 7 (cationic amino acid transporter, y+ system), member 11 Slc7a11 
Up-regulated T leukemia probe sets 
1449835_at 2.55 2.86 5.05 −0.30 −0.38 −0.35 Programmed cell death 1 Pdcd1 
Down-regulated B and T leukemia common probe sets 
1427127_x_at −6.03 −4.87 −2.83 −5.10 −5.83 −5.70 Heat shock protein 1B /// heat shock protein 1A Hspa1b /// Hspa1a 
1452318_a_at −5.74 −4.92 −3.09 −4.73 −5.26 −5.81 Heat shock protein 1B Hspa1b 
1427126_at −5.23 −4.56 −2.76 −4.92 −5.53 −5.75 Heat shock protein 1B Hspa1b 
1448123_s_at −3.86 −3.54 −3.37 −2.85 −2.70 −2.36 Transforming growth factor, β induced Tgfbi 
1448162_at −3.84 −3.92 −3.30 −4.15 −3.86 −4.01 Vascular cell adhesion molecule 1 Vcam1 
1456250_x_at −3.57 −3.18 −3.79 −2.29 −2.18 −2.24 Transforming growth factor, β induced Tgfbi 
1460423_x_at −3.39 −2.89 −2.13 −6.19 −6.45 −7.35 Ig κ chain IgM 
1418126_at −2.89 −2.92 −2.91 −2.02 −2.34 −2.80 Chemokine (C-C motif) ligand 5 Ccl5 
1417756_a_at −2.84 −5.14 −3.04 −2.50 −3.17 −2.19 Lymphocyte specific 1 Lsp1 
1449858_at −2.83 −2.82 −2.50 −4.78 −4.68 −2.89 CD86 antigen Cd86 
1449164_at −2.76 −3.00 −3.03 −2.83 −2.94 −2.67 CD68 antigen Cd68 
1418365_at −2.71 −3.02 −2.34 −4.61 −4.43 −5.66 Cathepsin H Ctsh 
1415989_at −2.46 −2.50 −2.69 −2.07 −2.32 −2.37 Vascular cell adhesion molecule 1 Vcam1 
1434499_a_at −2.44 −2.70 −6.15 −2.72 −2.91 −2.62 Lactate dehydrogenase 2, B chain Ldh2 
1448237_x_at −2.43 −2.82 −5.89 −2.01 −2.07 −2.07 Lactate dehydrogenase 2, B chain Ldh2 
1450381_a_at −2.23 −3.10 −2.91 −2.74 −3.38 −3.19 B-cell leukemia/lymphoma 6 Bcl6 
1450381_a_at −2.23 −3.10 −2.91 −2.74 −3.38 −3.19 B-cell leukemia/lymphoma 6 Bcl6 
Up-regulated B and T leukemia common probe sets 
1422967_a_at 2.03 2.96 2.87 2.32 3.45 2.72 Transferrin receptor Tfrc 
1422198_a_at 2.03 2.21 2.54 2.39 3.05 2.17 Serine hydroxymethyl transferase 1 (soluble) Shmt1 
1425179_at 2.15 2.31 2.71 2.80 3.32 2.52 Serine hydroxymethyl transferase 1 (soluble) Shmt1 
1425923_at 6.04 5.92 5.57 4.66 4.87 4.19 v-myc myelocytomatosis viral-related oncogene, neuroblastoma derived (avian) Mycn 

Results are presented in log base 2.

T1, T2, and T3 indicate T leukemias; B1, B2, and B3, B leukemias; CT, T control; and CB, B control.

*

Ratio T-CT: mean of the deviation of T1, T2, and T3/T control value.

†

Ratio B-CB: mean of the deviation of B1, B2, and B3/B control value.

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