Table 3.

Main findings* for proteins that were found associated with VTE risk in the VEBIOS discovery study and the results of their replication in FARIVE

Binder nameGeneVEBIOS-CitrateVEBIOS-EDTAFARIVE-Citrate
ControlsCasesControlsCasesControlsCases
(N = 85)(N = 88)(N = 86)(N = 87)(N = 589)(N = 580)
HPA050724 HIVEP1 6.734 (0.012) 6.820 (0.015) 7.066 (0.015) 7.172 (0.018) 6.370 (0.006) 6.384 (0.006) 
  β = +0.089 (0.019); P = 9.5 × 10−6 β = +0.107 (0.023); P = 5.9 × 10−6 β = +0.012 (0.009); P = .160 
HPA059686 GPX3 5.872 (0.016) 5.788 (0.012) 5.791 (0.021) 5.713 (0.016) 6.699 (0.006) 6.679 (0.007) 
  β = −0.086 (0.019); P = 1.4 × 10−5 β = −0.080 (0.025); P = 1.9 × 10−3 β = −0.018 (0.009); P = .036 
HPA002082 VWF 6.678 (0.025) 6.845 (0.033) 6.586 (0.030) 6.841 (0.043) 7.396 (0.015) 7.529 (0.016) 
  β = +0.170 (0.040); P = 2.0 × 10−5 β = −0.260 (0.048); P = 2.2 × 10−7 β = +0.130 (0.021); P = 5.2 × 10−10 
HPA011972 PDGFB 8.285 (0.012) 8.363 (0.016) 8.418 (0.013) 8.480 (0.015) 8.280 (0.005) 8.317 (0.006) 
  β = +0.082 (0.019); P = 3.0 × 10−5 β = +0.063 (0.019); P = 1.1 × 10−3 β = +0.037 (0.007); P = 1.7 × 10−7 
Binder nameGeneVEBIOS-CitrateVEBIOS-EDTAFARIVE-Citrate
ControlsCasesControlsCasesControlsCases
(N = 85)(N = 88)(N = 86)(N = 87)(N = 589)(N = 580)
HPA050724 HIVEP1 6.734 (0.012) 6.820 (0.015) 7.066 (0.015) 7.172 (0.018) 6.370 (0.006) 6.384 (0.006) 
  β = +0.089 (0.019); P = 9.5 × 10−6 β = +0.107 (0.023); P = 5.9 × 10−6 β = +0.012 (0.009); P = .160 
HPA059686 GPX3 5.872 (0.016) 5.788 (0.012) 5.791 (0.021) 5.713 (0.016) 6.699 (0.006) 6.679 (0.007) 
  β = −0.086 (0.019); P = 1.4 × 10−5 β = −0.080 (0.025); P = 1.9 × 10−3 β = −0.018 (0.009); P = .036 
HPA002082 VWF 6.678 (0.025) 6.845 (0.033) 6.586 (0.030) 6.841 (0.043) 7.396 (0.015) 7.529 (0.016) 
  β = +0.170 (0.040); P = 2.0 × 10−5 β = −0.260 (0.048); P = 2.2 × 10−7 β = +0.130 (0.021); P = 5.2 × 10−10 
HPA011972 PDGFB 8.285 (0.012) 8.363 (0.016) 8.418 (0.013) 8.480 (0.015) 8.280 (0.005) 8.317 (0.006) 
  β = +0.082 (0.019); P = 3.0 × 10−5 β = +0.063 (0.019); P = 1.1 × 10−3 β = +0.037 (0.007); P = 1.7 × 10−7 
*

Shown values correspond to log MFI relative to levels of the protein targeted by the HPA antibodies separately in controls and cases with the standard error. The β coefficient (standard error) corresponds to the log level’s increase in cases compared with controls, adjusted for age, sex and additionally center in FARIVE.

The statistical thresholds used for declaring statistical association were P = 6.6 × 10−5 (∼0.05/755) in VEBIOS and P = .0125 (=.05/4) in FARIVE.

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