RT-PCR Analysis of RNA Transcripts: Primer Sequences, PCR Conditions, and Sizes of PCR Products
| Gene . | Primers . | Sequence 5′→3′ . | Exon . | Hybridization T° . | Cycles No. . | [MgCl2] mmol/L . | Size of PCR Product . | Enzymes . |
|---|---|---|---|---|---|---|---|---|
| IDS | IDS 3a | TGTACGACTTCAACT | 3 | 47 | 35 | 2.5 | 158 | HpaII |
| CCTACTGGA | ||||||||
| (sense) | ||||||||
| IDS | AGACCAGCTATACG | 4 | ||||||
| GAGAATCAC*C | ||||||||
| (antisense) | ||||||||
| P55 | P55 H | AGAGCCCATGGGAA | 3-4 | 51 | 35 | 1.5 | 138 | Hha I |
| TCG*C | ||||||||
| (sense) | ||||||||
| P55 I | ACATTTGTGCCATTG | 4 | ||||||
| ATTTCTAGG | ||||||||
| (antisense) | ||||||||
| G6PD | G6PD-E10 | GCTGGACCTGACCTA | 10 | 59 | 35 | 3.0 | 79 | Pvu I |
| CGGCAACA | ||||||||
| (sense) | ||||||||
| G6PVPDPVU1 | GAAGACGTCCAGGA | 11 | ||||||
| TGAGGCGA*TC | ||||||||
| (antisense) |
| Gene . | Primers . | Sequence 5′→3′ . | Exon . | Hybridization T° . | Cycles No. . | [MgCl2] mmol/L . | Size of PCR Product . | Enzymes . |
|---|---|---|---|---|---|---|---|---|
| IDS | IDS 3a | TGTACGACTTCAACT | 3 | 47 | 35 | 2.5 | 158 | HpaII |
| CCTACTGGA | ||||||||
| (sense) | ||||||||
| IDS | AGACCAGCTATACG | 4 | ||||||
| GAGAATCAC*C | ||||||||
| (antisense) | ||||||||
| P55 | P55 H | AGAGCCCATGGGAA | 3-4 | 51 | 35 | 1.5 | 138 | Hha I |
| TCG*C | ||||||||
| (sense) | ||||||||
| P55 I | ACATTTGTGCCATTG | 4 | ||||||
| ATTTCTAGG | ||||||||
| (antisense) | ||||||||
| G6PD | G6PD-E10 | GCTGGACCTGACCTA | 10 | 59 | 35 | 3.0 | 79 | Pvu I |
| CGGCAACA | ||||||||
| (sense) | ||||||||
| G6PVPDPVU1 | GAAGACGTCCAGGA | 11 | ||||||
| TGAGGCGA*TC | ||||||||
| (antisense) |
Indicate the mismatched nucleotides introduced by the primer to create restriction sites.