Table 1

Somatic FAS mutations

PatientNucleotide changeLocationPredicted amino acid changeEffect
43 825G→T Exon 7 E195X* NMD, haploinsuffiency 
84 846(−9)_847del 11 Intron 7 E202MfsX4 (splice mutation)* Deletion of exon 8 and frameshifting plus premature termination in exon 9; dominant-negative effect 
135 846(−1)g→t Intron 7 E202MfsX4 (splice mutation)* Deletion of exon 8 and frameshifting plus premature termination in exon 9; dominant-negative effect 
228 972G→A Exon 9 D244N* Diminished FADD binding; dominant negative effect 
235 870(+1)g→a Intron 8 E202MfsX4 (splice mutation)* Deletion of exon 8 and frameshifting plus premature termination in exon 9; dominant-negative effect 
241 862_869del8 Exon 8 N207RfsX3* NMD, haploinsuffiency 
108 870G→T Exon 8 E202MfsX4 (splice mutation)* Deletion of exon 8 and frameshifting plus premature termination in exon 9; dominant-negative effect§ 
164 851_852delAG Exon 8 V204Gfs6* NMD, haploinsuffiency 
256 865T→G Exon 8 L208X* NMD, haploinsuffiency 
262 526A→G Exon 3 H95R* Decreased FasL binding; dominant-negative effect 
263 846(−1)g→a Intron 7 E202MfsX4 (splice mutation)* Deletion of exon 8 and frameshifting plus premature termination in exon 9; dominant-negative effect§ 
276 876_880del5 Exon 9 D212EfsX2* Premature termination in exon 9; dominant-negative effect 
PatientNucleotide changeLocationPredicted amino acid changeEffect
43 825G→T Exon 7 E195X* NMD, haploinsuffiency 
84 846(−9)_847del 11 Intron 7 E202MfsX4 (splice mutation)* Deletion of exon 8 and frameshifting plus premature termination in exon 9; dominant-negative effect 
135 846(−1)g→t Intron 7 E202MfsX4 (splice mutation)* Deletion of exon 8 and frameshifting plus premature termination in exon 9; dominant-negative effect 
228 972G→A Exon 9 D244N* Diminished FADD binding; dominant negative effect 
235 870(+1)g→a Intron 8 E202MfsX4 (splice mutation)* Deletion of exon 8 and frameshifting plus premature termination in exon 9; dominant-negative effect 
241 862_869del8 Exon 8 N207RfsX3* NMD, haploinsuffiency 
108 870G→T Exon 8 E202MfsX4 (splice mutation)* Deletion of exon 8 and frameshifting plus premature termination in exon 9; dominant-negative effect§ 
164 851_852delAG Exon 8 V204Gfs6* NMD, haploinsuffiency 
256 865T→G Exon 8 L208X* NMD, haploinsuffiency 
262 526A→G Exon 3 H95R* Decreased FasL binding; dominant-negative effect 
263 846(−1)g→a Intron 7 E202MfsX4 (splice mutation)* Deletion of exon 8 and frameshifting plus premature termination in exon 9; dominant-negative effect§ 
276 876_880del5 Exon 9 D212EfsX2* Premature termination in exon 9; dominant-negative effect 
*

Predicted protein based on change in nucleotide sequence.

Protein based on previously observed mutation in germline ALPS and predicted result.

NMD, nonsense-mediated decay.

§

870G→A and 846(−1)g→t have been in observed in ALPS type Ia.

Previously found to result in decreased FasL binding in patients with ALPS type Ia (A. Hsu, unpublished data, January 2004).

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