Table 3

Location of maximum linkage metrics defined by either an NPL score of 2.8 or higher or HLOD score of 1.8 or higher after the removal of high-LD SNP markers from analyses

ChromosomePosition, MbNPLPHLODModelP
Affection status based on CLL and B-cell LPD, n = 206 families       
––––2q21.2 134.5 3.02 .001 3.11 Common recessive 7.7×10−5 
––––5q23.2 124.4 2.12 .017 1.76 Rare recessive .004 
––––6p22.1 29.1 2.81 .003 2.22 Common recessive .001 
––––11q12.1 59.5 1.79 .037 1.95 Rare recessive .003 
––––18q21.1 42.5 2.66 .004 2.36 Rare dominant .001 
Affection status restricted to CLL, n = 182 families       
––––2q21.2 134.5 2.84 .002 2.56 Common recessive 6.0×10−4 
––––5q21.3 109.1 2.37 .009 1.36 Rare recessive .013 
––––6p22.1 29.1 2.44 .007 1.63 Common recessive .006 
––––11q12.1 58.4 1.54 .062 1.71 Rare recessive .005 
––––18q12.3 41.8 2.21 .014 1.92 Rare dominant .029 
ChromosomePosition, MbNPLPHLODModelP
Affection status based on CLL and B-cell LPD, n = 206 families       
––––2q21.2 134.5 3.02 .001 3.11 Common recessive 7.7×10−5 
––––5q23.2 124.4 2.12 .017 1.76 Rare recessive .004 
––––6p22.1 29.1 2.81 .003 2.22 Common recessive .001 
––––11q12.1 59.5 1.79 .037 1.95 Rare recessive .003 
––––18q21.1 42.5 2.66 .004 2.36 Rare dominant .001 
Affection status restricted to CLL, n = 182 families       
––––2q21.2 134.5 2.84 .002 2.56 Common recessive 6.0×10−4 
––––5q21.3 109.1 2.37 .009 1.36 Rare recessive .013 
––––6p22.1 29.1 2.44 .007 1.63 Common recessive .006 
––––11q12.1 58.4 1.54 .062 1.71 Rare recessive .005 
––––18q12.3 41.8 2.21 .014 1.92 Rare dominant .029 

α is the estimate of the proportion of families linked at a given genomic position.

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