SAM-defined overexpressed genes in HMCLs expressing HPSE
| Probeset . | Gene name . | Gene description . | SAM score . |
|---|---|---|---|
| 219403_s_at | HPSE | Heparanase | 1.82 |
| 222881_at | HPSE | Heparanase | 1.82 |
| 230241_at | IFRG15 | Interferon responsive gene 15 | 1.82 |
| 219253_at | FAM11B | Family with sequence similarity 11, member B | 1.78 |
| 227697_at | SOCS3 | Suppressor of cytokine signaling 3 | 1.78 |
| 212037_at | PNN | Pinin, desmosome-associated protein | 1.73 |
| HUMISGF3A_MA_at | STAT1 | Signal transducer and activator of transcription 1, 91 kDa | 1.73 |
| 204908_s_at | BCL3 | B-cell CLL/lymphoma 3 | 1.65 |
| 221876_at | DKFZp762P2 | Hypothetical protein DKFZp762P2111 | 1.65 |
| 218935_at | EHD3 | EH-domain containing 3 | 1.65 |
| 201316_at | PSMA2 | Proteasome (prosome macropain) subunit, alpha type 2 | 1.65 |
| HUMISGF3A_3_at | STAT1 | Signal transducer and activator of transcription 1, 91 kDa | 1.65 |
| 212269_s_at | MCM3AP | Minichromosome maintenance deficient 3-associated protein | 1.61 |
| 201286_at | SDC1 | Syndecan-1 | 1.61 |
| 238418_at | SLC35B4 | Solute carrier family 35, member B4 | 1.61 |
| 209969_s_at | STAT1 | Signal transducer and activator of transcription 1, 91 kDa | 1.61 |
| 230917_at | — | — | 1.57 |
| 227749_at | — | — | 1.57 |
| 202086_at | MX1 | Myxovirus resistance 1, interferon-inducible protein p78 (mouse) | 1.57 |
| 237942_at | SNRK | SNF related kinase | 1.57 |
| HUMISGF3A_3_at | STAT1 | Signal transducer and activator of transcription 1, 91 kDa | 1.57 |
| 237299_at | — | — | 1.53 |
| 221764_at | C19ORF22 | Chromosome 19 open reading frame 22 | 1.53 |
| 217925_s_at | C6ORF106 | Chromosome 6 open reading frame 106 | 1.53 |
| 201082_s_at | DCTN1 | Dynactin 1 (p150, glued homolog, Drosophila) | 1.53 |
| 206662_at | GLRX | Glutaredoxin (thioltransferase) | 1.53 |
| 227713_at | KATNAL1 | Katanin p60 subunit A-like 1 | 1.53 |
| 225752_at | NIPA1 | Nonimprinted in Prader-Willi/Angelman syndrome 1 | 1.53 |
| 201964_at | ALS4 | Amyotrophic lateral sclerosis 4; juvenile | 1.49 |
| 207522_s_at | ATP2A3 | ATPase, Ca++ transporting, ubiquitous | 1.49 |
| 236831_at | C3orf6 | Chromosome 3 open reading frame 6 | 1.49 |
| 239629_at | CFLAR | CASP8 and FADD-like apoptosis regulator | 1.49 |
| 225097_at | HIPK2 | Homeodomain interacting protein kinase 2 | 1.49 |
| 211824_x_at | NALP1 | NACHT, leucine rich repeat and PYD containing 1 | 1.49 |
| 213241_at | PLXNC1 | Plexin C1 | 1.49 |
| 226782_at | SLC25A30 | Solute carrier family 25, member 30 | 1.49 |
| 235035_at | SLC35E1 | Solute carrier family 35, member E1 | 1.49 |
| 212926_at | SMC5L1 | SMC5 structural maintenance of chromosomes 5-like 1 (yeast) | 1.49 |
| HUMISGF3A_MA_at | STAT1 | Signal transducer and activator of transcription 1, 91 kDa | 1.49 |
| 200887_s_at | STAT1 | Signal transducer and activator of transcription 1, 91 kDa | 1.49 |
| 209197_at | SYT11 | Synaptotagmin XI | 1.49 |
| Probeset . | Gene name . | Gene description . | SAM score . |
|---|---|---|---|
| 219403_s_at | HPSE | Heparanase | 1.82 |
| 222881_at | HPSE | Heparanase | 1.82 |
| 230241_at | IFRG15 | Interferon responsive gene 15 | 1.82 |
| 219253_at | FAM11B | Family with sequence similarity 11, member B | 1.78 |
| 227697_at | SOCS3 | Suppressor of cytokine signaling 3 | 1.78 |
| 212037_at | PNN | Pinin, desmosome-associated protein | 1.73 |
| HUMISGF3A_MA_at | STAT1 | Signal transducer and activator of transcription 1, 91 kDa | 1.73 |
| 204908_s_at | BCL3 | B-cell CLL/lymphoma 3 | 1.65 |
| 221876_at | DKFZp762P2 | Hypothetical protein DKFZp762P2111 | 1.65 |
| 218935_at | EHD3 | EH-domain containing 3 | 1.65 |
| 201316_at | PSMA2 | Proteasome (prosome macropain) subunit, alpha type 2 | 1.65 |
| HUMISGF3A_3_at | STAT1 | Signal transducer and activator of transcription 1, 91 kDa | 1.65 |
| 212269_s_at | MCM3AP | Minichromosome maintenance deficient 3-associated protein | 1.61 |
| 201286_at | SDC1 | Syndecan-1 | 1.61 |
| 238418_at | SLC35B4 | Solute carrier family 35, member B4 | 1.61 |
| 209969_s_at | STAT1 | Signal transducer and activator of transcription 1, 91 kDa | 1.61 |
| 230917_at | — | — | 1.57 |
| 227749_at | — | — | 1.57 |
| 202086_at | MX1 | Myxovirus resistance 1, interferon-inducible protein p78 (mouse) | 1.57 |
| 237942_at | SNRK | SNF related kinase | 1.57 |
| HUMISGF3A_3_at | STAT1 | Signal transducer and activator of transcription 1, 91 kDa | 1.57 |
| 237299_at | — | — | 1.53 |
| 221764_at | C19ORF22 | Chromosome 19 open reading frame 22 | 1.53 |
| 217925_s_at | C6ORF106 | Chromosome 6 open reading frame 106 | 1.53 |
| 201082_s_at | DCTN1 | Dynactin 1 (p150, glued homolog, Drosophila) | 1.53 |
| 206662_at | GLRX | Glutaredoxin (thioltransferase) | 1.53 |
| 227713_at | KATNAL1 | Katanin p60 subunit A-like 1 | 1.53 |
| 225752_at | NIPA1 | Nonimprinted in Prader-Willi/Angelman syndrome 1 | 1.53 |
| 201964_at | ALS4 | Amyotrophic lateral sclerosis 4; juvenile | 1.49 |
| 207522_s_at | ATP2A3 | ATPase, Ca++ transporting, ubiquitous | 1.49 |
| 236831_at | C3orf6 | Chromosome 3 open reading frame 6 | 1.49 |
| 239629_at | CFLAR | CASP8 and FADD-like apoptosis regulator | 1.49 |
| 225097_at | HIPK2 | Homeodomain interacting protein kinase 2 | 1.49 |
| 211824_x_at | NALP1 | NACHT, leucine rich repeat and PYD containing 1 | 1.49 |
| 213241_at | PLXNC1 | Plexin C1 | 1.49 |
| 226782_at | SLC25A30 | Solute carrier family 25, member 30 | 1.49 |
| 235035_at | SLC35E1 | Solute carrier family 35, member E1 | 1.49 |
| 212926_at | SMC5L1 | SMC5 structural maintenance of chromosomes 5-like 1 (yeast) | 1.49 |
| HUMISGF3A_MA_at | STAT1 | Signal transducer and activator of transcription 1, 91 kDa | 1.49 |
| 200887_s_at | STAT1 | Signal transducer and activator of transcription 1, 91 kDa | 1.49 |
| 209197_at | SYT11 | Synaptotagmin XI | 1.49 |
These data are the 41 probesets overexpressed at least 2-fold in the 11 HPSEpos HMCLs compared with the 8 HPSEneg HMCLs (SAM analysis with a FDR of 7.7%). Genes are ordered based on the SAM score.
— indicates Expressed Sequence Tags (EST).