ISGS expression levels in HIV-1–infected MDMs measured by microarrays
| GenBank accession no. . | Gene name . | Fold change (duplicate) array . | B value (duplicate) . |
|---|---|---|---|
| NM_080657 | Viperin | 7.1 (6.8) | 4.7 (3.2) |
| NM_001547 | IFIT-2 | 4.5 (4.5) | 11.8 (11.7) |
| NM_001548 | IFIT-1 | 4.3 (4.1) | 11.2 (11.5) |
| NM_006820 | IFI44L | 2.9 (2.6) | 4.9 (5.5) |
| NM_002462 | MX1 | 2.6 (2.6) | 5.9 (5.2) |
| NM_014314 | RIGI (DDX58) | 2.5 (2.1) | 5.4 (6.7) |
| NM_005101 | ISG15 | 2.1 (1.9) | 3.9 (2.7) |
| NM_006187 | 2,5 OAS 3 | 1.9 (1.9) | 1.5 (4.4) |
| NM_006074 | TRIM 22 | 1.9 (1.6) | 0.3 (1.5) |
| NM_007315 | STAT-1 | 1.6 (1.6) | 1.9 (2.1) |
| GenBank accession no. . | Gene name . | Fold change (duplicate) array . | B value (duplicate) . |
|---|---|---|---|
| NM_080657 | Viperin | 7.1 (6.8) | 4.7 (3.2) |
| NM_001547 | IFIT-2 | 4.5 (4.5) | 11.8 (11.7) |
| NM_001548 | IFIT-1 | 4.3 (4.1) | 11.2 (11.5) |
| NM_006820 | IFI44L | 2.9 (2.6) | 4.9 (5.5) |
| NM_002462 | MX1 | 2.6 (2.6) | 5.9 (5.2) |
| NM_014314 | RIGI (DDX58) | 2.5 (2.1) | 5.4 (6.7) |
| NM_005101 | ISG15 | 2.1 (1.9) | 3.9 (2.7) |
| NM_006187 | 2,5 OAS 3 | 1.9 (1.9) | 1.5 (4.4) |
| NM_006074 | TRIM 22 | 1.9 (1.6) | 0.3 (1.5) |
| NM_007315 | STAT-1 | 1.6 (1.6) | 1.9 (2.1) |
MDMs from 4 donors were exposed to HIV-1 or to AT2–HIV-1 or mock infected for 5 days. Hybridizations to microarrays were performed for the comparisons of the effects of HIV-1, AT2–HIV-1, and mock treatments on the transcriptome of MDMs. The mean fold changes and B values for HIV-1/mock hybridization are shown here for each duplicate spot.