ISM included in the discovery cohort (n = 200): univariate analyses of prognostic factors for PFS and OS
. | No. of cases/total cases . | PFS . | OS . | ||
---|---|---|---|---|---|
Median (y) . | P* . | Median (y) . | P* . | ||
Clinical and laboratory variables | |||||
Age at diagnosis | |||||
≥55 y | 52/200 | NR | .008 | NR | NS |
<55 y | 148/200 | 32 | NR | ||
Organomegalies | NR | ||||
Hepatomegaly | |||||
No | 181/196 | 32 | NS | NR | NS |
Yes | 15/196 | NR | NR | ||
Splenomegaly | |||||
No | 186/196 | 32 | NS | NR | NS |
Yes | 10/196 | NR | NR | ||
Hepatomegaly/splenomegaly | |||||
No | 174/196 | 32 | NS | NR | NS |
Yes | 22/196 | NR | NR | ||
Osteolysis/osteoporosis | |||||
Yes | 141/170 | 32 | NS | NR | NS |
No | 29/170 | NR | NR | ||
Biochemical features | |||||
ANC | |||||
≤2.6 × 109/L | 30/184 | NR | NS | NR | NS |
>2.6 × 109/L | 154/184 | NR | NR | ||
No. of platelets | |||||
≤150 × 109/L | 8/189 | NR | NS | NR | NS |
>150 × 109/L | 181/189 | 32 | NR | ||
Hemoglobin | |||||
≤110 g/L | 1/189 | NR | NS | NR | NS |
>110 g/L | 188/189 | 32 | NR | ||
LDH | |||||
>230 U/L | 140/190 | NR | .001 | NR | NS |
≤230 U/L | 50/190 | 30 | NR | ||
SAP | |||||
<140 U/L | 182/193 | 32 | .001 | NR | <.001 |
≥140 U/L | 7/193 | NR | NR | ||
sβ2M | |||||
<2.5 µg/mL | 170/187 | NR | <.001 | NR | <.001 |
≥2.5 µg/mL | 17/187 | 5 | NR | ||
IgE | |||||
<100 KU/L | 154/176 | 30 | NS | NR | NS |
≥100 KU/L | 22/176 | NR | NR | ||
Genetic features | |||||
Gene variants | |||||
ASXL1 | |||||
WT | 193/200 | 32 | NR | ||
VUS | 5/200 | NR | NS | NR | NS |
Pathogenic | 2/200 | 2 | <.001 | NR | <.001 |
CDH11 | |||||
WT | 199/200 | 32 | NR | ||
VUS | 1/200 | NR | NS | NR | <.001 |
DNMT3A | |||||
WT | 190/200 | 32 | NR | ||
VUS | 3/200 | NR | NS | NR | NS |
Pathogenic | 7/200 | 6 | <.001 | NR | <.001 |
EPHA7 | |||||
WT | 199/200 | 32 | NR | ||
VUS | 1/200 | NR | NS | NR | NS |
ITGA10 | |||||
WT | 198/200 | 32 | NR | ||
Pathogenic | 2/200 | NR | NS | NR | NS |
KAT6B | |||||
WT | 199/200 | 32 | NR | ||
VUS | 1/200 | NR | NS | NR | NS |
PIK3CD | |||||
WT | 197/200 | 32 | NR | ||
VUS | 3/200 | NR | NS | NR | NS |
ROS1 | |||||
WT | 197/200 | 32 | NR | ||
VUS | 3/200 | NR | NS | NR | NS |
RUNX1 | |||||
WT | 198/200 | 32 | NR | ||
VUS | 1/200 | NR | NS | NR | NS |
Pathogenic | 1/200 | 2 | <.001 | NR | <.001 |
SF3B1 | |||||
WT | 198/200 | 32 | NR | ||
VUS | 2/200 | NR | NS | NR | NS |
TET2 | |||||
WT | 194/200 | 32 | NR | ||
VUS | 2/200 | NR | NS | NR | NS |
Pathogenic | 2/200 | NR | NS | NR | NS |
A/R/D gene pathogenic variants | |||||
No | 191/200 | 32 | NR | ||
Yes | 9/200 | 5 | <.001 | NR | <.001 |
A/R/D gene pathogenic variants | |||||
≥30% | 192/200 | 32 | NR | ||
<30% | 8/200 | 4 | <.001 | 7 | <.001 |
Number of mutated cases | |||||
Isolated KIT mutation | 165/200 | 32 | NR | ||
≥1 VUS variant | 21/200 | NR | NS | NR | NS |
≥1 Pathogenic variant other than KIT | 14/200 | 6 | <.001 | NR | <.001 |
KIT mutational profile in the BM | |||||
MC restricted | 106/200 | NR | <.001 | NR | .009 |
Multilineal involvement† | 94/200 | 30 | NR | ||
BM KIT D816V allele frequency | |||||
<1% | 118/191 | NR | <.001 | NR | .004 |
≥1% | 73/191 | 30 | NR | ||
PB KIT D816V allele frequency | |||||
<6% | 83/96 | NR | <.001 | NR | .03 |
≥6% | 13/96 | 15 | NR |
. | No. of cases/total cases . | PFS . | OS . | ||
---|---|---|---|---|---|
Median (y) . | P* . | Median (y) . | P* . | ||
Clinical and laboratory variables | |||||
Age at diagnosis | |||||
≥55 y | 52/200 | NR | .008 | NR | NS |
<55 y | 148/200 | 32 | NR | ||
Organomegalies | NR | ||||
Hepatomegaly | |||||
No | 181/196 | 32 | NS | NR | NS |
Yes | 15/196 | NR | NR | ||
Splenomegaly | |||||
No | 186/196 | 32 | NS | NR | NS |
Yes | 10/196 | NR | NR | ||
Hepatomegaly/splenomegaly | |||||
No | 174/196 | 32 | NS | NR | NS |
Yes | 22/196 | NR | NR | ||
Osteolysis/osteoporosis | |||||
Yes | 141/170 | 32 | NS | NR | NS |
No | 29/170 | NR | NR | ||
Biochemical features | |||||
ANC | |||||
≤2.6 × 109/L | 30/184 | NR | NS | NR | NS |
>2.6 × 109/L | 154/184 | NR | NR | ||
No. of platelets | |||||
≤150 × 109/L | 8/189 | NR | NS | NR | NS |
>150 × 109/L | 181/189 | 32 | NR | ||
Hemoglobin | |||||
≤110 g/L | 1/189 | NR | NS | NR | NS |
>110 g/L | 188/189 | 32 | NR | ||
LDH | |||||
>230 U/L | 140/190 | NR | .001 | NR | NS |
≤230 U/L | 50/190 | 30 | NR | ||
SAP | |||||
<140 U/L | 182/193 | 32 | .001 | NR | <.001 |
≥140 U/L | 7/193 | NR | NR | ||
sβ2M | |||||
<2.5 µg/mL | 170/187 | NR | <.001 | NR | <.001 |
≥2.5 µg/mL | 17/187 | 5 | NR | ||
IgE | |||||
<100 KU/L | 154/176 | 30 | NS | NR | NS |
≥100 KU/L | 22/176 | NR | NR | ||
Genetic features | |||||
Gene variants | |||||
ASXL1 | |||||
WT | 193/200 | 32 | NR | ||
VUS | 5/200 | NR | NS | NR | NS |
Pathogenic | 2/200 | 2 | <.001 | NR | <.001 |
CDH11 | |||||
WT | 199/200 | 32 | NR | ||
VUS | 1/200 | NR | NS | NR | <.001 |
DNMT3A | |||||
WT | 190/200 | 32 | NR | ||
VUS | 3/200 | NR | NS | NR | NS |
Pathogenic | 7/200 | 6 | <.001 | NR | <.001 |
EPHA7 | |||||
WT | 199/200 | 32 | NR | ||
VUS | 1/200 | NR | NS | NR | NS |
ITGA10 | |||||
WT | 198/200 | 32 | NR | ||
Pathogenic | 2/200 | NR | NS | NR | NS |
KAT6B | |||||
WT | 199/200 | 32 | NR | ||
VUS | 1/200 | NR | NS | NR | NS |
PIK3CD | |||||
WT | 197/200 | 32 | NR | ||
VUS | 3/200 | NR | NS | NR | NS |
ROS1 | |||||
WT | 197/200 | 32 | NR | ||
VUS | 3/200 | NR | NS | NR | NS |
RUNX1 | |||||
WT | 198/200 | 32 | NR | ||
VUS | 1/200 | NR | NS | NR | NS |
Pathogenic | 1/200 | 2 | <.001 | NR | <.001 |
SF3B1 | |||||
WT | 198/200 | 32 | NR | ||
VUS | 2/200 | NR | NS | NR | NS |
TET2 | |||||
WT | 194/200 | 32 | NR | ||
VUS | 2/200 | NR | NS | NR | NS |
Pathogenic | 2/200 | NR | NS | NR | NS |
A/R/D gene pathogenic variants | |||||
No | 191/200 | 32 | NR | ||
Yes | 9/200 | 5 | <.001 | NR | <.001 |
A/R/D gene pathogenic variants | |||||
≥30% | 192/200 | 32 | NR | ||
<30% | 8/200 | 4 | <.001 | 7 | <.001 |
Number of mutated cases | |||||
Isolated KIT mutation | 165/200 | 32 | NR | ||
≥1 VUS variant | 21/200 | NR | NS | NR | NS |
≥1 Pathogenic variant other than KIT | 14/200 | 6 | <.001 | NR | <.001 |
KIT mutational profile in the BM | |||||
MC restricted | 106/200 | NR | <.001 | NR | .009 |
Multilineal involvement† | 94/200 | 30 | NR | ||
BM KIT D816V allele frequency | |||||
<1% | 118/191 | NR | <.001 | NR | .004 |
≥1% | 73/191 | 30 | NR | ||
PB KIT D816V allele frequency | |||||
<6% | 83/96 | NR | <.001 | NR | .03 |
≥6% | 13/96 | 15 | NR |