Table 1.

Binding specificity for the interaction between human PGRP-S and synthetic PGN fragments



Association constant Kd (M)
PGN fragment
rhPGRP-S
rdPGRP-LC
(GlcNAc-MurNAc-l-Ala-d-iso Gln-l-Lys-d-Ala)2  3.69 × 10−6 ± 2.65 × 10−6  NO  
(GlcNAc-MurNAc-l-Ala-d-isoGln-l-Lys)2  5.50 × 10−8 ± 3.13 × 10−8  NO  
(GlcNAc-MurNAc-l-Ala-d-isoGln)2  NO   NO  
GlcNAc-MurNAc-l-Ala-d-isoGln   NO   NO  
MurNAc-l-Ala-d-isoGln-l-Lys   NO   NO  
MurNAc-l-Ala-d-isoGln
 
NO
 
NO
 


Association constant Kd (M)
PGN fragment
rhPGRP-S
rdPGRP-LC
(GlcNAc-MurNAc-l-Ala-d-iso Gln-l-Lys-d-Ala)2  3.69 × 10−6 ± 2.65 × 10−6  NO  
(GlcNAc-MurNAc-l-Ala-d-isoGln-l-Lys)2  5.50 × 10−8 ± 3.13 × 10−8  NO  
(GlcNAc-MurNAc-l-Ala-d-isoGln)2  NO   NO  
GlcNAc-MurNAc-l-Ala-d-isoGln   NO   NO  
MurNAc-l-Ala-d-isoGln-l-Lys   NO   NO  
MurNAc-l-Ala-d-isoGln
 
NO
 
NO
 

Each value was determined as described in “Materials and methods” and is expressed as the mean ± SD of 3 independent experiments.

NO indicates Kd value not obtained because of weak binding of the tested PGN fragment at concentrations up to 80 μM.

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