Differential Tag Abundance in Two Types of Macrophages
| Fold . | Tag Sequence . | No. . | GenBank Match (accession no.) . | ||
|---|---|---|---|---|---|
| Mono . | GM . | M . | |||
| GM/M | |||||
| 19 | CCTTTTTCAA | 4 | 19 | 1 | No match |
| 17 | CAAATCCAAA | 3 | 34 | 2 | No match |
| 15 | CTGACAGTGA | 11 | 15 | 1 | RING6 for mRNA HLA class II α chain like product (X62744) |
| 15 | GCCTACCCGA | 0 | 15 | 0 | Pancreatic carcinoma marker GA733-1 (X13425) |
| 15 | AACGGGGCCC | 0 | 117 | 8 | MDC (D83171) |
| 14 | CCCGCCTCTT | 4 | 14 | 0 | No match |
| 13 | ACGGAACAAT | 0 | 26 | 2 | Prostaglandin D synthetase (M61901) |
| 12 | ATCGTGCGCT | 10 | 12 | 0 | TGF-β (M16658) |
| 12 | CGCACCTCCA | 7 | 12 | 0 | No match |
| 12 | CAGTTGCTAT | 4 | 12 | 1 | No match |
| 12 | GCCTGTCTGC | 0 | 12 | 0 | No match |
| 12 | TAAGCAGGAC | 0 | 12 | 1 | No match |
| 12 | GCCGGCCGGA | 3 | 11 | 1 | No match |
| 11 | ATGTGAAGAG | 1 | 31 | 3 | Osteonectin (J03040) |
| 10 | TTTGGGCCTA | 49 | 10 | 1 | Cystain-rich protein (U58630) |
| M/GM | |||||
| 18 | TTGGAACAAT | 1 | 0 | 18 | No match |
| 17 | GGGGCTTCTG | 0 | 2 | 34 | Legumain (D55696) |
| 15 | TGATGTTTGA | 16 | 0 | 15 | No match |
| 15 | TTGGCCCAAG | 0 | 1 | 15 | No match |
| 14 | CTTTTTTCCC | 19 | 0 | 14 | CD48 (M59904) |
| 14 | CACTCGTGTG | 3 | 1 | 14 | No match |
| 14 | CCTAACTGGA | 0 | 1 | 14 | No match |
| 14 | GAGGGAGTCC | 0 | 1 | 14 | No match |
| 14 | TGGGCTCTGA | 0 | 1 | 14 | Lysosomal sialoglycoprotein (D12676) |
| 13 | TACCTGCAGA | 287 | 0 | 13 | MRP-8 (X06234) |
| 13 | CCGAAGGGTC | 10 | 0 | 13 | No match |
| 13 | GGTTGGGGGC | 3 | 0 | 13 | No match |
| 13 | TTTGTCTGTG | 0 | 1 | 13 | No match |
| 12 | CCAAGAACAG | 8 | 1 | 12 | Preprogalanin (A28025) |
| 12 | CATCTAAACT | 6 | 1 | 12 | No match |
| Fold . | Tag Sequence . | No. . | GenBank Match (accession no.) . | ||
|---|---|---|---|---|---|
| Mono . | GM . | M . | |||
| GM/M | |||||
| 19 | CCTTTTTCAA | 4 | 19 | 1 | No match |
| 17 | CAAATCCAAA | 3 | 34 | 2 | No match |
| 15 | CTGACAGTGA | 11 | 15 | 1 | RING6 for mRNA HLA class II α chain like product (X62744) |
| 15 | GCCTACCCGA | 0 | 15 | 0 | Pancreatic carcinoma marker GA733-1 (X13425) |
| 15 | AACGGGGCCC | 0 | 117 | 8 | MDC (D83171) |
| 14 | CCCGCCTCTT | 4 | 14 | 0 | No match |
| 13 | ACGGAACAAT | 0 | 26 | 2 | Prostaglandin D synthetase (M61901) |
| 12 | ATCGTGCGCT | 10 | 12 | 0 | TGF-β (M16658) |
| 12 | CGCACCTCCA | 7 | 12 | 0 | No match |
| 12 | CAGTTGCTAT | 4 | 12 | 1 | No match |
| 12 | GCCTGTCTGC | 0 | 12 | 0 | No match |
| 12 | TAAGCAGGAC | 0 | 12 | 1 | No match |
| 12 | GCCGGCCGGA | 3 | 11 | 1 | No match |
| 11 | ATGTGAAGAG | 1 | 31 | 3 | Osteonectin (J03040) |
| 10 | TTTGGGCCTA | 49 | 10 | 1 | Cystain-rich protein (U58630) |
| M/GM | |||||
| 18 | TTGGAACAAT | 1 | 0 | 18 | No match |
| 17 | GGGGCTTCTG | 0 | 2 | 34 | Legumain (D55696) |
| 15 | TGATGTTTGA | 16 | 0 | 15 | No match |
| 15 | TTGGCCCAAG | 0 | 1 | 15 | No match |
| 14 | CTTTTTTCCC | 19 | 0 | 14 | CD48 (M59904) |
| 14 | CACTCGTGTG | 3 | 1 | 14 | No match |
| 14 | CCTAACTGGA | 0 | 1 | 14 | No match |
| 14 | GAGGGAGTCC | 0 | 1 | 14 | No match |
| 14 | TGGGCTCTGA | 0 | 1 | 14 | Lysosomal sialoglycoprotein (D12676) |
| 13 | TACCTGCAGA | 287 | 0 | 13 | MRP-8 (X06234) |
| 13 | CCGAAGGGTC | 10 | 0 | 13 | No match |
| 13 | GGTTGGGGGC | 3 | 0 | 13 | No match |
| 13 | TTTGTCTGTG | 0 | 1 | 13 | No match |
| 12 | CCAAGAACAG | 8 | 1 | 12 | Preprogalanin (A28025) |
| 12 | CATCTAAACT | 6 | 1 | 12 | No match |
Each of the 15 transcripts displaying the greatest difference between GM-CSF– and M-CSF–induced macrophages. No. indicates the number of times the tag was identified. Conditions are as described in Fig 2.