Genetic mapping and conserved syntenies in the evolution of KLF family genes
| Dre gene . | Dre locus . | Dre GB . | Dre EST . | Hsa gene . | Hsa cytogenetics . | Hsa GB4 (cR3000) . | Reference . |
|---|---|---|---|---|---|---|---|
| klfd | |||||||
| klfd | HS6_20.5 | ? | KLF1 | 19p13.12 | 19_73.90 | Current study | |
| KLF2 | 19p13.13-p13.11 | 19_86.89 | |||||
| ctl2 | HS6_23.1 | AI722360 | fc26c03 | CTL2 | 19p13.1 | 19_68.54 | 48 |
| klf12 | |||||||
| fgb | HS1_19.7 | AA658651 | fa55c11 | FGB | 4q28 | 4_635.80 | 48 |
| mellar | HS1_27.8 | U31822 | MTNR1A | 4q35.1 | 47 | ||
| slc34a2 | HS1_29.5 | AF121796 | SLC34A2 | 4p15.3-p15.1 | Y.Y. and J.H.P.* | ||
| tolloid | HS1_41.3 | AF027596 | TLL1 | 4q32-q33 | 48 | ||
| zef2 | HS1_49.6 | U84616 | NERF2 | 4_615.56 | 34 | ||
| klf12 | HS1_52.1 | LOC51274 | 4_174.08 | Current study | |||
| ednra1 | HS1_58.4 | AI545753 | fb75g12 | EDNRA | 4_630.42 | 34 | |
| hmx1 | HS1_62.4 | AI658291 | fc21b03 | HMX1 | 4p16.1 | 48 | |
| msxb | HS1_72.1 | U16311 | MSX1 | 4p16.1 | 4_34.92 | 34 | |
| lef1 | HS1_77.8 | AF136454 | LEF1 | 4q23-q25 | 48 | ||
| gpsn2 | HS1_93.8 | AI106232 | db03b10 | GPSN2 | 4_457.36 | 48 | |
| klf2a | |||||||
| dkfzp572c163.1 | HS22_08.6 | AI721563 | fc29c08 | DKFZp572C163.1 | 19p13.1 | 19_110.54 | 48 |
| tim44 | HS22_17.0 | AI617238 | zehn1275 | TIM44 | 19p13.3-19p13.2 | 48 | |
| ela2 | HS22_25.0 | AI522803 | fb62f03 | ELA2 | 19p13.3 | 48 | |
| klf2a | HS22_25.2 | KLF2 | 19p13.13-p13.11 | 19_86.89 | Current study | ||
| kiaa0223 | HS22_30.3 | AI477812 | fb55d04 | KIAA0223 | 19p13.3 | 48 | |
| dkfzp586O0120 | HS22_30.3 | AI722693 | fc30d06 | DKFZP586O0120 | 19 | 48 | |
| oaz | HS22_30.3 | AB017117 | OAZ1 | 19p13.3 | 48 | ||
| mbd3 | HS22_30.3 | AI667514 | fc41c05 | MBD3 | 19p13.3 | Y.Y. and J.H.P.* | |
| tle1 | HS22_33.2 | AI588095 | fb96a10 | TLE1 | 19p13.3 | 48 | |
| uba52 | HS22_60.2 | AI330380 | fa91f08 | UBA52 | 19p13.1-p12 | Y.Y. and J.H.P.* | |
| calr | HS22_16.3 | AF195882 | CALR | 19p13.3-p13.2 | 19_71.27 | 68 | |
| klf2b | |||||||
| Z9615 | HS2_48.0 | G41653 | PTPRS | 19p13.3 | 19_34.68 | 69 | |
| ifi30 | HS2_59.3 | AI384734 | fb12b04 | IFI30 | 19p13.1 | 19_104.14 | 48 |
| myo9b | HS2_83.6 | AI497441 | fb53f01 | MYO9B | 19p13.1 | 48 | |
| elavl1 | HS2_83.6 | U17600 | ELAVL1 | 19p13.2 | 19_52.59 | 34,48 | |
| eef2 | HS2_131.9 | AI332171 | fa93h02 | EEF2 | 19pter-q12 | 19_31.19 | Y.Y. and J.H.P.* |
| caps | HS2_134.9 | AW174520 | fj05b10 | CAPS | 19p13.3 | 48 | |
| klf2b | HS2_136.5 | KLF2 | 19p13.13-p13.11 | 19_86.89 | Current study | ||
| klf4 | |||||||
| rxraa | HS2_53.9 | U29940 | RXRA | 9q34.3 | 9_414.54 | 34 | |
| phapi2b | HS2_62.0 | AI444255 | fb40e12 | PHAPI2B | 9pq | 9_314.98 | Y.Y. and J.H.P.* |
| klf4 | HS2_73.1 | KLF4 | 9q31 | Current study | |||
| ptc1 | HS2_78.1 | X98883 | PTCH | 9q22.3 | 9_310.90 | 34 | |
| tnw | HS2_81.1 | AJ001423 | TNC | 9q32-q34 | 9_357.98 | 47 |
| Dre gene . | Dre locus . | Dre GB . | Dre EST . | Hsa gene . | Hsa cytogenetics . | Hsa GB4 (cR3000) . | Reference . |
|---|---|---|---|---|---|---|---|
| klfd | |||||||
| klfd | HS6_20.5 | ? | KLF1 | 19p13.12 | 19_73.90 | Current study | |
| KLF2 | 19p13.13-p13.11 | 19_86.89 | |||||
| ctl2 | HS6_23.1 | AI722360 | fc26c03 | CTL2 | 19p13.1 | 19_68.54 | 48 |
| klf12 | |||||||
| fgb | HS1_19.7 | AA658651 | fa55c11 | FGB | 4q28 | 4_635.80 | 48 |
| mellar | HS1_27.8 | U31822 | MTNR1A | 4q35.1 | 47 | ||
| slc34a2 | HS1_29.5 | AF121796 | SLC34A2 | 4p15.3-p15.1 | Y.Y. and J.H.P.* | ||
| tolloid | HS1_41.3 | AF027596 | TLL1 | 4q32-q33 | 48 | ||
| zef2 | HS1_49.6 | U84616 | NERF2 | 4_615.56 | 34 | ||
| klf12 | HS1_52.1 | LOC51274 | 4_174.08 | Current study | |||
| ednra1 | HS1_58.4 | AI545753 | fb75g12 | EDNRA | 4_630.42 | 34 | |
| hmx1 | HS1_62.4 | AI658291 | fc21b03 | HMX1 | 4p16.1 | 48 | |
| msxb | HS1_72.1 | U16311 | MSX1 | 4p16.1 | 4_34.92 | 34 | |
| lef1 | HS1_77.8 | AF136454 | LEF1 | 4q23-q25 | 48 | ||
| gpsn2 | HS1_93.8 | AI106232 | db03b10 | GPSN2 | 4_457.36 | 48 | |
| klf2a | |||||||
| dkfzp572c163.1 | HS22_08.6 | AI721563 | fc29c08 | DKFZp572C163.1 | 19p13.1 | 19_110.54 | 48 |
| tim44 | HS22_17.0 | AI617238 | zehn1275 | TIM44 | 19p13.3-19p13.2 | 48 | |
| ela2 | HS22_25.0 | AI522803 | fb62f03 | ELA2 | 19p13.3 | 48 | |
| klf2a | HS22_25.2 | KLF2 | 19p13.13-p13.11 | 19_86.89 | Current study | ||
| kiaa0223 | HS22_30.3 | AI477812 | fb55d04 | KIAA0223 | 19p13.3 | 48 | |
| dkfzp586O0120 | HS22_30.3 | AI722693 | fc30d06 | DKFZP586O0120 | 19 | 48 | |
| oaz | HS22_30.3 | AB017117 | OAZ1 | 19p13.3 | 48 | ||
| mbd3 | HS22_30.3 | AI667514 | fc41c05 | MBD3 | 19p13.3 | Y.Y. and J.H.P.* | |
| tle1 | HS22_33.2 | AI588095 | fb96a10 | TLE1 | 19p13.3 | 48 | |
| uba52 | HS22_60.2 | AI330380 | fa91f08 | UBA52 | 19p13.1-p12 | Y.Y. and J.H.P.* | |
| calr | HS22_16.3 | AF195882 | CALR | 19p13.3-p13.2 | 19_71.27 | 68 | |
| klf2b | |||||||
| Z9615 | HS2_48.0 | G41653 | PTPRS | 19p13.3 | 19_34.68 | 69 | |
| ifi30 | HS2_59.3 | AI384734 | fb12b04 | IFI30 | 19p13.1 | 19_104.14 | 48 |
| myo9b | HS2_83.6 | AI497441 | fb53f01 | MYO9B | 19p13.1 | 48 | |
| elavl1 | HS2_83.6 | U17600 | ELAVL1 | 19p13.2 | 19_52.59 | 34,48 | |
| eef2 | HS2_131.9 | AI332171 | fa93h02 | EEF2 | 19pter-q12 | 19_31.19 | Y.Y. and J.H.P.* |
| caps | HS2_134.9 | AW174520 | fj05b10 | CAPS | 19p13.3 | 48 | |
| klf2b | HS2_136.5 | KLF2 | 19p13.13-p13.11 | 19_86.89 | Current study | ||
| klf4 | |||||||
| rxraa | HS2_53.9 | U29940 | RXRA | 9q34.3 | 9_414.54 | 34 | |
| phapi2b | HS2_62.0 | AI444255 | fb40e12 | PHAPI2B | 9pq | 9_314.98 | Y.Y. and J.H.P.* |
| klf4 | HS2_73.1 | KLF4 | 9q31 | Current study | |||
| ptc1 | HS2_78.1 | X98883 | PTCH | 9q22.3 | 9_310.90 | 34 | |
| tnw | HS2_81.1 | AJ001423 | TNC | 9q32-q34 | 9_357.98 | 47 |
This table displays the mapping data for genes from both human and zebrafish genomes that demonstrate the existence of chromosomal regions surrounding the zebrafish klf genes with conserved synteny to the human genome and the KLF genes therein.
Dre indicates Danio rerio; Hsa, Homo sapiens.
Y.Y. and J.H.P., unpublished data, 2000.