Reconciling previously described structural features of αIIb and β3 extracellular domains with regions of the αvβ3 crystal structure
Subunit . | Old . | New . | Properties/function . |
---|---|---|---|
α | |||
Ca2+-binding domain | β-propeller | Known for many years to require μM levels of Ca2+ to maintain structural integrity, this 7-bladed, propeller-like domain contributes to the integrin head and forms the major site of contact with the β subunit. | |
Heavy-/light-chain cleavage site | NA | Evident only upon reduced SDS-PAGE, posttranslational cleavage of the α subunit takes place within the Golgi apparatus but appears inconsequential for integrin structure or function. | |
β | |||
N-terminal cysteine-rich domain | PSI domain | Flexible, immunogenic domain composed of residues 1-54, including 3 disulfide bonds and 1 “extra” cysteine that couples the N-terminus to the bent-hinge region of the integrin; harbors the clinically important PlAl alloantigen at Leu33. | |
Chymotrypsin-resistant domain | Hybrid domain | Immunoglobulin-like domain composed of discontinuous residues 55-108 and 353-434. The ligand-binding βA domain emerges from the 2 β-sheets that comprise this domain (see below). | |
Large disulfide-bonded loop | βA domain | Residues 109-352. The ligand-binding domain that, together with the αIIb β-propeller, forms nearly half of the previously visualized integrin head. Antibodies that bind this domain can inhibit ligand binding; easily removed from the rest of the molecule by protease cleavage at flanking residues 121 and 348. The resulting 66-kDa subunit still contains the PlAl epitope but can no longer bind ligand. | |
Cysteine-rich repeats | EGF repeats | Protease-resistant stalk composed of 4 repeating EGF domains that may broker integrin conformational changes. |
Subunit . | Old . | New . | Properties/function . |
---|---|---|---|
α | |||
Ca2+-binding domain | β-propeller | Known for many years to require μM levels of Ca2+ to maintain structural integrity, this 7-bladed, propeller-like domain contributes to the integrin head and forms the major site of contact with the β subunit. | |
Heavy-/light-chain cleavage site | NA | Evident only upon reduced SDS-PAGE, posttranslational cleavage of the α subunit takes place within the Golgi apparatus but appears inconsequential for integrin structure or function. | |
β | |||
N-terminal cysteine-rich domain | PSI domain | Flexible, immunogenic domain composed of residues 1-54, including 3 disulfide bonds and 1 “extra” cysteine that couples the N-terminus to the bent-hinge region of the integrin; harbors the clinically important PlAl alloantigen at Leu33. | |
Chymotrypsin-resistant domain | Hybrid domain | Immunoglobulin-like domain composed of discontinuous residues 55-108 and 353-434. The ligand-binding βA domain emerges from the 2 β-sheets that comprise this domain (see below). | |
Large disulfide-bonded loop | βA domain | Residues 109-352. The ligand-binding domain that, together with the αIIb β-propeller, forms nearly half of the previously visualized integrin head. Antibodies that bind this domain can inhibit ligand binding; easily removed from the rest of the molecule by protease cleavage at flanking residues 121 and 348. The resulting 66-kDa subunit still contains the PlAl epitope but can no longer bind ligand. | |
Cysteine-rich repeats | EGF repeats | Protease-resistant stalk composed of 4 repeating EGF domains that may broker integrin conformational changes. |
NA indicates not applicable; and SDS-PAGE, sodium dodecyl sulfate-polyacrylamide gel electrophoresis.