Table 1.

Reconciling previously described structural features of αIIb and β3 extracellular domains with regions of the αvβ3 crystal structure


Subunit

Old

New

Properties/function
α     
  Ca2+-binding domain   β-propeller   Known for many years to require μM levels of Ca2+ to maintain structural integrity, this 7-bladed, propeller-like domain contributes to the integrin head and forms the major site of contact with the β subunit.  
  Heavy-/light-chain cleavage site   NA   Evident only upon reduced SDS-PAGE, posttranslational cleavage of the α subunit takes place within the Golgi apparatus but appears inconsequential for integrin structure or function.  
β     
  N-terminal cysteine-rich domain   PSI domain   Flexible, immunogenic domain composed of residues 1-54, including 3 disulfide bonds and 1 “extra” cysteine that couples the N-terminus to the bent-hinge region of the integrin; harbors the clinically important PlAl alloantigen at Leu33.  
  Chymotrypsin-resistant domain   Hybrid domain   Immunoglobulin-like domain composed of discontinuous residues 55-108 and 353-434. The ligand-binding βA domain emerges from the 2 β-sheets that comprise this domain (see below).  
  Large disulfide-bonded loop   βA domain   Residues 109-352. The ligand-binding domain that, together with the αIIb β-propeller, forms nearly half of the previously visualized integrin head. Antibodies that bind this domain can inhibit ligand binding; easily removed from the rest of the molecule by protease cleavage at flanking residues 121 and 348. The resulting 66-kDa subunit still contains the PlAl epitope but can no longer bind ligand.  

 
Cysteine-rich repeats
 
EGF repeats
 
Protease-resistant stalk composed of 4 repeating EGF domains that may broker integrin conformational changes.
 

Subunit

Old

New

Properties/function
α     
  Ca2+-binding domain   β-propeller   Known for many years to require μM levels of Ca2+ to maintain structural integrity, this 7-bladed, propeller-like domain contributes to the integrin head and forms the major site of contact with the β subunit.  
  Heavy-/light-chain cleavage site   NA   Evident only upon reduced SDS-PAGE, posttranslational cleavage of the α subunit takes place within the Golgi apparatus but appears inconsequential for integrin structure or function.  
β     
  N-terminal cysteine-rich domain   PSI domain   Flexible, immunogenic domain composed of residues 1-54, including 3 disulfide bonds and 1 “extra” cysteine that couples the N-terminus to the bent-hinge region of the integrin; harbors the clinically important PlAl alloantigen at Leu33.  
  Chymotrypsin-resistant domain   Hybrid domain   Immunoglobulin-like domain composed of discontinuous residues 55-108 and 353-434. The ligand-binding βA domain emerges from the 2 β-sheets that comprise this domain (see below).  
  Large disulfide-bonded loop   βA domain   Residues 109-352. The ligand-binding domain that, together with the αIIb β-propeller, forms nearly half of the previously visualized integrin head. Antibodies that bind this domain can inhibit ligand binding; easily removed from the rest of the molecule by protease cleavage at flanking residues 121 and 348. The resulting 66-kDa subunit still contains the PlAl epitope but can no longer bind ligand.  

 
Cysteine-rich repeats
 
EGF repeats
 
Protease-resistant stalk composed of 4 repeating EGF domains that may broker integrin conformational changes.
 

NA indicates not applicable; and SDS-PAGE, sodium dodecyl sulfate-polyacrylamide gel electrophoresis.

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