Table 1.

Alphabetical listing of the mRNAs and median values of cases and control subjects and their range (normalized to CDKN1A)




Patients

Controls

Gene symbol
Descriptive name
Median
Range
Median
Range
P
B2M  Beta-2-microglobulin   NA*  NA*  NA*  NA*  NA  
BMI1  BMI-1 oncogene homolog   0.84   0.09-2.18   0.76   0.00-2.41   < .001  
CCL3  Chemokine (C-C motif) ligand 3   0.14   0.00-0.85   0.13   0.00-1.16   < .001  
CCL4  Chemokine (C-C motif) ligand 4   1.30   0.23-*  1.26   0.23-*  .57  
CDKN1A  Cyclin-dependent kinase inhibitor 1A   NA   NA   NA   NA   NA  
GSTP1  Glutathione S-transferase   0.31   0.00-1.36   0.29   0.00-1.05   < .001  
IFNG  Interferon, gamma   0.16   0.00-0.80   0.15   0.00-1.78   .21  
IL10  Interleukin 10   0.00   0.00-0.73   0.00   0.00-0.45   .006  
IL12A  Interleukin 12, subunit p35   3.04   0.16-*  2.76   0.16-*  < .001  
IL12B  Interleukin 12, subunit p40   0.00   0.00-0.33   0.00   0.00-1.78   .06  
IL13  Interleukin 13   0.00   0.00-0.26   0.00   0.0-0.08   .96  
IL15 (1)  Interleukin 15, transcript variants 1 and 3   0.48   0.13-2.59   0.46   0.16-2.52   .014  
IL15 (2)  Interleukin 15, transcript variant 2   0.00   0.00-0.26   0.00   0.00-0.08   .003  
IL18  Interleukin 18   0.12   0.00-1.45   0.11   0.00-0.97   .009  
IL1A  Interleukin 1, alpha   0.00   0.00-0.39   0.00   0.00-0.31   < .001  
IL1B  Interleukin 1, beta   0.99   0.24-*  0.87   0.14-*  < .001  
IL1RN  Interleukin 1 receptor antagonist   1.90   0.54-*  1.71   0.47-*  < .001  
IL2  Interleukin 2   0.07   0.00-0.52   0.03   0.00-1.19   < .001  
IL4 (1)  Interleukin 4, transcript variant 1   0.00   0.00-0.31   0.00   0.00-0.22   .79  
IL4 (2)  Interleukin 4, transcript variants 1 and 2   0.03   0.00-0.46   0.00   0.00-0.51   < .001  
IL6  Interleukin 6   0.00   0.00-0.24   0.00   0.00-0.28   .11  
IL8  Interleukin 8   1.38   0.00-*  1.30   0.00-*  .06  
LTA  Lymphotoxin alpha (Tumor necrosis factor, beta)   0.25   0.00-1.08   0.23   0.00-0.82   < .001  
MCP-1  Monocyte chemotactic protein, 1   0.00   0.00-8.22   0.14   0.00-0.70   .31  
MCP-2  Monocyte chemotactic protein, 2   0.00   0.00-10.36   0.00   0.00-0.66   .07  
MIF  Macrophage migration inhibitory factor   0.91   0.00-3.95   0.75   0.00-3.98   < .001  
MYC  v-myc oncogene homolog   1.41   0.43-*  1.25   0.28-*  < .001  
NFKB1  nuclear factor kappa-B, subunit 1   1.12   0.43-*  1.02   0.19-*  < .001  
NFKB2  nuclear factor kappa-B, subunit 2   0.00   0.00-0.29   0.00   0.00-0.20   .049  
NFKBIA  nuclear factor kappa-B inhibitor, alpha   2.98   0.65-*  2.66   0.55-*  < .001  
PARN  Polyadenylate-specific ribonuclease   2.27   0.71-*  2.34   0.67-*  .41  
PDE4B  Phosphodiesterase 4B, cAMP-specific   2.23   0.54-*  2.12   0.58-*  < .001  
PDGFB  Platelet-derived growth factor, beta polypeptide   0.15   0.00-0.65   0.13   0.00-0.75   .002  
PI9  proteinase inhibitor 9, ovalbumin type   1.81   0.24-*  1.58   0.00-*  < .001  
PTP4A2  Protein-tyrosine phosphatase, type 4A, 2   NA*  NA*  NA*  NA*  NA  
PTPN1  Protein-tyrosine phosphatase, nonreceptor-type, 1   0.24   0.00-0.63   0.21   0.00-0.79   < .001  
TF  Tissue factor   0.00   0.00-0.13   0.00   0.00-0.07   .54  
THBS1  Thrombospondin 1   0.29   0.00-1.47   0.30   0.00-1.40   .75  
TNF  Tumor necrosis factor, alpha   0.00   0.00-0.32   0.00   0.00-0.21   .014  
TNFRSF1A
 
Tumor necrosis factor receptor superfamily, 1A
 
2.77
 
1.02-*
 
2.57
 
0.77-*
 
< .001
 



Patients

Controls

Gene symbol
Descriptive name
Median
Range
Median
Range
P
B2M  Beta-2-microglobulin   NA*  NA*  NA*  NA*  NA  
BMI1  BMI-1 oncogene homolog   0.84   0.09-2.18   0.76   0.00-2.41   < .001  
CCL3  Chemokine (C-C motif) ligand 3   0.14   0.00-0.85   0.13   0.00-1.16   < .001  
CCL4  Chemokine (C-C motif) ligand 4   1.30   0.23-*  1.26   0.23-*  .57  
CDKN1A  Cyclin-dependent kinase inhibitor 1A   NA   NA   NA   NA   NA  
GSTP1  Glutathione S-transferase   0.31   0.00-1.36   0.29   0.00-1.05   < .001  
IFNG  Interferon, gamma   0.16   0.00-0.80   0.15   0.00-1.78   .21  
IL10  Interleukin 10   0.00   0.00-0.73   0.00   0.00-0.45   .006  
IL12A  Interleukin 12, subunit p35   3.04   0.16-*  2.76   0.16-*  < .001  
IL12B  Interleukin 12, subunit p40   0.00   0.00-0.33   0.00   0.00-1.78   .06  
IL13  Interleukin 13   0.00   0.00-0.26   0.00   0.0-0.08   .96  
IL15 (1)  Interleukin 15, transcript variants 1 and 3   0.48   0.13-2.59   0.46   0.16-2.52   .014  
IL15 (2)  Interleukin 15, transcript variant 2   0.00   0.00-0.26   0.00   0.00-0.08   .003  
IL18  Interleukin 18   0.12   0.00-1.45   0.11   0.00-0.97   .009  
IL1A  Interleukin 1, alpha   0.00   0.00-0.39   0.00   0.00-0.31   < .001  
IL1B  Interleukin 1, beta   0.99   0.24-*  0.87   0.14-*  < .001  
IL1RN  Interleukin 1 receptor antagonist   1.90   0.54-*  1.71   0.47-*  < .001  
IL2  Interleukin 2   0.07   0.00-0.52   0.03   0.00-1.19   < .001  
IL4 (1)  Interleukin 4, transcript variant 1   0.00   0.00-0.31   0.00   0.00-0.22   .79  
IL4 (2)  Interleukin 4, transcript variants 1 and 2   0.03   0.00-0.46   0.00   0.00-0.51   < .001  
IL6  Interleukin 6   0.00   0.00-0.24   0.00   0.00-0.28   .11  
IL8  Interleukin 8   1.38   0.00-*  1.30   0.00-*  .06  
LTA  Lymphotoxin alpha (Tumor necrosis factor, beta)   0.25   0.00-1.08   0.23   0.00-0.82   < .001  
MCP-1  Monocyte chemotactic protein, 1   0.00   0.00-8.22   0.14   0.00-0.70   .31  
MCP-2  Monocyte chemotactic protein, 2   0.00   0.00-10.36   0.00   0.00-0.66   .07  
MIF  Macrophage migration inhibitory factor   0.91   0.00-3.95   0.75   0.00-3.98   < .001  
MYC  v-myc oncogene homolog   1.41   0.43-*  1.25   0.28-*  < .001  
NFKB1  nuclear factor kappa-B, subunit 1   1.12   0.43-*  1.02   0.19-*  < .001  
NFKB2  nuclear factor kappa-B, subunit 2   0.00   0.00-0.29   0.00   0.00-0.20   .049  
NFKBIA  nuclear factor kappa-B inhibitor, alpha   2.98   0.65-*  2.66   0.55-*  < .001  
PARN  Polyadenylate-specific ribonuclease   2.27   0.71-*  2.34   0.67-*  .41  
PDE4B  Phosphodiesterase 4B, cAMP-specific   2.23   0.54-*  2.12   0.58-*  < .001  
PDGFB  Platelet-derived growth factor, beta polypeptide   0.15   0.00-0.65   0.13   0.00-0.75   .002  
PI9  proteinase inhibitor 9, ovalbumin type   1.81   0.24-*  1.58   0.00-*  < .001  
PTP4A2  Protein-tyrosine phosphatase, type 4A, 2   NA*  NA*  NA*  NA*  NA  
PTPN1  Protein-tyrosine phosphatase, nonreceptor-type, 1   0.24   0.00-0.63   0.21   0.00-0.79   < .001  
TF  Tissue factor   0.00   0.00-0.13   0.00   0.00-0.07   .54  
THBS1  Thrombospondin 1   0.29   0.00-1.47   0.30   0.00-1.40   .75  
TNF  Tumor necrosis factor, alpha   0.00   0.00-0.32   0.00   0.00-0.21   .014  
TNFRSF1A
 
Tumor necrosis factor receptor superfamily, 1A
 
2.77
 
1.02-*
 
2.57
 
0.77-*
 
< .001
 

P values are according to the (2-tailed) Mann-Whitney test.

*

mRNA levels above the detection limit.

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