Summary of CTCL patient characteristics
Patient ID . | Sex . | Age, y . | Therapy during experiment time period . | Previous therapy . | Experiment time period . | Most recent prior treatment . | FISH . |
---|---|---|---|---|---|---|---|
1 | M | 72 | ECP, IFN-α, BEX | None | 5/2019- | – | Normal for screened genes |
10/2019 | |||||||
2 | M | 78 | ECP, BEX, N2M | None | 1/2019- | – | Normal for screened genes |
8/2019 | |||||||
3 | F | 71 | ECP, BEX | ACIT | 2/2019 | – | – |
4 | F | 67 | ROMI, BEX | ECP | 11/2018-9/2019 | – | Amp: None |
Del: TP53, ARID1A, ZEB1, DNMT3A, FAS | |||||||
5 | F | 77 | ECP, BEX | MTX, VORI, ROMI | 8/2019 | VORI: 07/2019 | Normal for screened genes |
MTX, ROMI: 08/2019 | |||||||
6 | F | 41 | EPOCH, ROMI, MOGA | ECP, BEX, N2M, IMQ, BRENT | 10/2018- | BEX, N2M: 9/2018 | – |
9/2019 | BRENT: 11/2018 | ||||||
7 | M | 83 | ECP, BEX | None | 5/2019- | – | Amp: MYC |
10/2019 | Del: None | ||||||
8 | F | 63 | ROMI | ECP, IFN-α, BEX | 1/2019- | BEX: 04/2017 | Amp: MYC, STAT3 |
2/2020 | Del: TP53, ZEB1, DNMT3A | ||||||
9 | M | 69 | ECP, NB-UVB | None | 3/2019- | – | Normal for screened genes |
10/2019 | |||||||
10 | M | 56 | ECP, BEX | DUP, prednisone, topical steroids | 2/2020 | DUP: 01/2020 | Normal for screened genes |
11 | M | 75 | BEX | None | 5/2019- | – | Amp: None |
10/2019 | Del: DNMT3A, ATM,TP53, RB1, D9Z3, ZEB1, FAS | ||||||
12 | F | 83 | ECP, BEX | MTX | 8/2018 | MTX: 03/2018 | Amp: MYC, STAT3 |
Del: TP53 | |||||||
13 | M | 80 | ECP, NB-UVB, IFN-α, BEX | NB-UVB | 6/2018 | ROMI: 2016 | Amp: MYC, STAT3, CARD11 |
Del: TP53, ZEB1, DNMT3A, FAS | |||||||
14 | F | 77 | ECP, BEX | None | 7/2019 | – | Amp: MYC |
15 | M | 85 | ECP | None | 2/2020 | – | Amp: ARID1A, STAT3, ZEB1, DNMT3A, CARD11, CDKN2A, D9Z3 |
16 | M | 81 | ECP | BRENT, BEX, MTX | 11/2019 | BRENT: 10/2018 | Amp: MYC, CDKN2A, D9Z3 |
BEX: 03/2019 | Del: DNMT3, FAS, ATM, RB1 | ||||||
MTX: 07/2019 | |||||||
17 | M | 70 | ROMI | ECP, MYCO, ACIT, MTX, DUP, BEX, IFN-α | 12/2018- | MYCO,ACIT, MTX, DUP: 5/2018 | Amp: MYC, STAT3 |
10/2019 | BEX: 2/2019 | Del: ARID1A | |||||
18 | F | 67 | ECP, BEX, IFN-γ, IFN-α | NB-UVB | 11/2018- | – | Amp: MYC |
2/2020 | Del: ZEB1,TP53, CDKN2A, STAT3 | ||||||
19 | M | 75 | ECP, IFN-α, BEX | NB-UVB | 9/2019- | – | – |
10/2019 |
Patient ID . | Sex . | Age, y . | Therapy during experiment time period . | Previous therapy . | Experiment time period . | Most recent prior treatment . | FISH . |
---|---|---|---|---|---|---|---|
1 | M | 72 | ECP, IFN-α, BEX | None | 5/2019- | – | Normal for screened genes |
10/2019 | |||||||
2 | M | 78 | ECP, BEX, N2M | None | 1/2019- | – | Normal for screened genes |
8/2019 | |||||||
3 | F | 71 | ECP, BEX | ACIT | 2/2019 | – | – |
4 | F | 67 | ROMI, BEX | ECP | 11/2018-9/2019 | – | Amp: None |
Del: TP53, ARID1A, ZEB1, DNMT3A, FAS | |||||||
5 | F | 77 | ECP, BEX | MTX, VORI, ROMI | 8/2019 | VORI: 07/2019 | Normal for screened genes |
MTX, ROMI: 08/2019 | |||||||
6 | F | 41 | EPOCH, ROMI, MOGA | ECP, BEX, N2M, IMQ, BRENT | 10/2018- | BEX, N2M: 9/2018 | – |
9/2019 | BRENT: 11/2018 | ||||||
7 | M | 83 | ECP, BEX | None | 5/2019- | – | Amp: MYC |
10/2019 | Del: None | ||||||
8 | F | 63 | ROMI | ECP, IFN-α, BEX | 1/2019- | BEX: 04/2017 | Amp: MYC, STAT3 |
2/2020 | Del: TP53, ZEB1, DNMT3A | ||||||
9 | M | 69 | ECP, NB-UVB | None | 3/2019- | – | Normal for screened genes |
10/2019 | |||||||
10 | M | 56 | ECP, BEX | DUP, prednisone, topical steroids | 2/2020 | DUP: 01/2020 | Normal for screened genes |
11 | M | 75 | BEX | None | 5/2019- | – | Amp: None |
10/2019 | Del: DNMT3A, ATM,TP53, RB1, D9Z3, ZEB1, FAS | ||||||
12 | F | 83 | ECP, BEX | MTX | 8/2018 | MTX: 03/2018 | Amp: MYC, STAT3 |
Del: TP53 | |||||||
13 | M | 80 | ECP, NB-UVB, IFN-α, BEX | NB-UVB | 6/2018 | ROMI: 2016 | Amp: MYC, STAT3, CARD11 |
Del: TP53, ZEB1, DNMT3A, FAS | |||||||
14 | F | 77 | ECP, BEX | None | 7/2019 | – | Amp: MYC |
15 | M | 85 | ECP | None | 2/2020 | – | Amp: ARID1A, STAT3, ZEB1, DNMT3A, CARD11, CDKN2A, D9Z3 |
16 | M | 81 | ECP | BRENT, BEX, MTX | 11/2019 | BRENT: 10/2018 | Amp: MYC, CDKN2A, D9Z3 |
BEX: 03/2019 | Del: DNMT3, FAS, ATM, RB1 | ||||||
MTX: 07/2019 | |||||||
17 | M | 70 | ROMI | ECP, MYCO, ACIT, MTX, DUP, BEX, IFN-α | 12/2018- | MYCO,ACIT, MTX, DUP: 5/2018 | Amp: MYC, STAT3 |
10/2019 | BEX: 2/2019 | Del: ARID1A | |||||
18 | F | 67 | ECP, BEX, IFN-γ, IFN-α | NB-UVB | 11/2018- | – | Amp: MYC |
2/2020 | Del: ZEB1,TP53, CDKN2A, STAT3 | ||||||
19 | M | 75 | ECP, IFN-α, BEX | NB-UVB | 9/2019- | – | – |
10/2019 |
CTCL subtypes are subtypes at the time of diagnosis. Current therapy is defined as treatment at the time of experiment. Fluorescence in situ hybridization (FISH) panel20 screened genes include: ATM, TP53, RB1, CDKN2A, MYC, ARID1A, ZEB1, STAT3, DNMT3A, CARD11, and FAS. ACIT, acitretin; BEX, bexarotene; BRENT, brentuximab; DUP, dupilumab; ECP, extracorporeal photopheresis; EPOCH, etoposide, prednisone, vincristine, cyclophosphamide, doxorubicin; F, female; ID, identifier; IFN, interferon; IMQ, imiquimod; M, male; MOGA, mogamulizumab; MTX, methotrexate; MYCO, mycophenolic acid; N2M, mechlorethamine; NB-UVB, narrow band UV-B; ROMI, romidepsin; VORI, vorinostat.