Figure 6.
Gene set enrichment analysis shows increase in IFN-I production in BM pDCs of St3gal1MK−/− mice. (A) Dot plot summarizing Gene Set Enrichment Analysis statistics (P adjusted values [p-adj], normalized enrichment scores [NES], and set size) of IFN and IFN-α/β Reactome pathways comparing combined pDC clusters (1, 2, 11, and 12, also show discretely) with non-pDC clusters. Positive (normalized) enrichment scores indicate increased enrichment in St3gal1MK−/−clusters. (B) Representative enrichment plots of IFN gene sets from combined pDC clusters. (C) A heat map of IFN and IFN-α/β reactome genes of each cluster. KO, knockout; WT, wild type.