Figure 1.
BLEAT leader assignment. Two scenarios are depicted using the 2 HLA-B alleles from 1 subject to illustrate a simple use case (HLA-B*07:06:01) and a more complex use case (HLA-B*56:01:01G). For clarity, only the last 5 alleles (by number) are displayed for HLA-B*56:01:01G.36 (A) The leader peptide is deduced from the exon 1 sequence. (B) The deduced leader peptide is available from IMGT in the Anthony Nolan HLA Informatics Group GitHub repository.35 (C) This information is processed and reflected on BLEAT’s user interface to display P2 information. The user may hover over the P2 “Leader” icon to reveal a tooltip (D) that organizes all potential HLA-B alleles from the provided allele into known and unknown major (and any minor, if applicable) leader alleles. Rare minor leader alleles are highlighted with red on the user interface.