Figure 3.
STAT3Y640Fenhances DNA binding and transcriptional activity. (A) Density heat map visualizing signal strength around peak summits across union consensus binding sites in STAT3, STAT3Y640F, empty vector, and input ChIP-seq samples. (B) Results from differential binding analysis of STAT3 and STAT3Y640F-V5–tagged ChIP-seq analysis depicted as a pie chart. (C) Representative illustration of ChIP-seq tracks showing the binding profiles of STAT3 and STAT3Y640F at the Socs3 promoter region. (D) Transcriptome analysis: heat map of genes differentially expressed (FDR < 0.05) in any of the 3 differential expression analyses performed (STAT3 vs empty vector, STAT3Y640F vs empty vector, STAT3Y640F vs STAT3). Canonical STAT3 target genes are highlighted. (E) Significant hallmark gene sets (FDR < 0.05) from gene set enrichment analysis (GSEA) of 3 differential expression analyses shown in panel D. DBA, differential binding analysis. FDR, false discovery rate.