Figure 5.
Molecular validation of enhancer-promoter interaction in ChiPSC22t(7;12) upon differentiation. (A) Scheme of the enhancer deletion experiment performed to validate the interaction between the MNX1 promoter and enhancers distal to the BP. (B) Gene expression in HSPCs derived from ChiPSC22WT (n = 3), ChiPSC22t(7;12) (n = 4, from 2 independent cell lines), and ChiPSC22t(7;12)ΔEn (n = 3, from 2 independent cell lines) measured via qRT-PCR and shown as 2−ΔCt vs GUSB as endogenous reference. ∗∗∗∗P < .0001; ∗∗∗P < .001; ∗∗P < .01; ∗P < .05. ns, not significant.

Molecular validation of enhancer-promoter interaction in ChiPSC22t(7;12) upon differentiation. (A) Scheme of the enhancer deletion experiment performed to validate the interaction between the MNX1 promoter and enhancers distal to the BP. (B) Gene expression in HSPCs derived from ChiPSC22WT (n = 3), ChiPSC22t(7;12) (n = 4, from 2 independent cell lines), and ChiPSC22t(7;12)ΔEn (n = 3, from 2 independent cell lines) measured via qRT-PCR and shown as 2−ΔCt vs GUSB as endogenous reference. ∗∗∗∗P < .0001; ∗∗∗P < .001; ∗∗P < .01; ∗P < .05. ns, not significant.

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