Figure 6
Figure 6. ERG identifies genomic regions important in hematopoietic development and has cell type specific binding profiles. (A) Schematic representation of normal and aberrant hematopoietic differentiation. HSC indicates hematopoietic stem cells; and LSC, leukemic stem cells. (B) Overview of the OGG1, CAMK1, and SPI1 ERG binding sites in normal CD34+ cells and ERG and AML1-ETO (AE) binding sites in blast cells from a patient with t(8;21). Yellow represents the ERG ChIP-seq data; and blue, the AML1-ETO data. (C) Heatmap display of motif scores of DNA sequences underlying ERG binding sites in normal CD34+ cells. (D) Venn diagram representing the overlap of ERG (pz12) and the common AML1-ETO binding sites of t(8;21) patient AML cells and ERG binding sites in normal CD34+ cells. (E) Venn diagram representing the overlap of ERG binding sites in normal CD34+ cells, t(15;17) APL cells, and t(8;21) AML patient cells (pz12). (F) Number of RUNX1 motifs present in t(8;21) patient ERG binding sites not occupied by AML1-ETO (left) or present in AML1-ETO binding sites (right).

ERG identifies genomic regions important in hematopoietic development and has cell type specific binding profiles. (A) Schematic representation of normal and aberrant hematopoietic differentiation. HSC indicates hematopoietic stem cells; and LSC, leukemic stem cells. (B) Overview of the OGG1, CAMK1, and SPI1 ERG binding sites in normal CD34+ cells and ERG and AML1-ETO (AE) binding sites in blast cells from a patient with t(8;21). Yellow represents the ERG ChIP-seq data; and blue, the AML1-ETO data. (C) Heatmap display of motif scores of DNA sequences underlying ERG binding sites in normal CD34+ cells. (D) Venn diagram representing the overlap of ERG (pz12) and the common AML1-ETO binding sites of t(8;21) patient AML cells and ERG binding sites in normal CD34+ cells. (E) Venn diagram representing the overlap of ERG binding sites in normal CD34+ cells, t(15;17) APL cells, and t(8;21) AML patient cells (pz12). (F) Number of RUNX1 motifs present in t(8;21) patient ERG binding sites not occupied by AML1-ETO (left) or present in AML1-ETO binding sites (right).

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