Figure 6
Figure 6. Poised genes tend to be downregulated and hypermethylated in IDH2R172 mutant AITL. (A) GSEA analysis of genes differentially expressed between TET2-single mutant and IDH2/TET2-double mutant groups shows the enrichment of H3K27me3-associated genes. (B) Poised genes expressed in CD4+ T cells are downregulated in AITL with IDH2R172 mutations. (C) Comparison of the DNA methylation patterns between poised genes and nonpoised genes in AITL, analyzing autosomal genes in the top half of mean gene expression in the 4 normal T-cell control samples. The poised genes are significantly more likely to be hypermethylated than nonpoised genes (P = 1.3 × 10−17, Fisher’s exact test).

Poised genes tend to be downregulated and hypermethylated in IDH2R172 mutant AITL. (A) GSEA analysis of genes differentially expressed between TET2-single mutant and IDH2/TET2-double mutant groups shows the enrichment of H3K27me3-associated genes. (B) Poised genes expressed in CD4+ T cells are downregulated in AITL with IDH2R172 mutations. (C) Comparison of the DNA methylation patterns between poised genes and nonpoised genes in AITL, analyzing autosomal genes in the top half of mean gene expression in the 4 normal T-cell control samples. The poised genes are significantly more likely to be hypermethylated than nonpoised genes (P = 1.3 × 10−17, Fisher’s exact test).

Close Modal

or Create an Account

Close Modal
Close Modal