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Journal Articles

Single Cell Whole Genome Measurement of Genomic Heterogeneity and Clonal Evolution in Multiple Myeloma

Andrew McPherson, Kylee H Maclachlan, Matthew Myers, Gryte Satas, Ola Landgren, Saad Z Usmani, Sohrab P Shah, Francesco Maura
Journal: Blood
Blood (2023) 142 (Supplement 1): 4722.
https://doi.org/10.1182/blood-2023-191065
Published: 2023
Journal Articles

DNA Liquid Biopsies for Cancer-Associated Venous Thromboembolism Prediction

Justin Jee, Angela Rose Brannon, Chris Fong, Adrian Lee, Lauren Gray, Karl Pichotta, Anisha Luthra, Monica Diosdado, Mohammad Haque, Jiannan Guo, Jennifer Hernandez, Kavita Garg, Andriy Derkach, Clare Wilhelm, Rohan Singh, Maria E. Arcila, Nick Pavlakis, Stephen Clarke, Sohrab P Shah, Pedram Razavi, Jorge Reis-Filho, Marc Ladanyi, Nikolaus Schultz, Jeffrey I. Zwicker, Michael F. Berger, Bob T Li, Simon Mantha
Journal: Blood
Blood (2023) 142 (Supplement 1): 569.
https://doi.org/10.1182/blood-2023-172820
Published: 2023
Journal Articles

Single-Cell Profiling Reveals Clinically Relevant Evolutionary Trajectories and Alternate Biologies in Human Follicular Lymphoma

Xuehai Wang, Michael Nissen, Deanne Gracias, Manabu Kusakabe, Guillermo Simkin, Gerben Duns, Clementine Sarkozy, Elizabeth Chavez, Gabriela Cristina Segat, Jubin Kim, Aixiang Jiang, Tomohiro Aoki, Rashedul Islam, Christina May, Stacy Hung, Kateryna Tyshchenko, Ryan Brinkman, Martin Hirst, Aly Karsan, Ciara L. Freeman, Laurie H. Sehn, Kerry J. Savage, Jeffrey W Craig, David W. Scott, Christian Steidl, Sohrab P Shah, Andrew P. Weng
Journal: Blood
Blood (2021) 138 (Supplement 1): 450.
https://doi.org/10.1182/blood-2021-153237
Published: 2021
Journal Articles

Characterization of DLBCL with a PMBL gene expression signature

Gerben Duns, Elena Viganò, Daisuke Ennishi, Clementine Sarkozy, Stacy S. Hung, Elizabeth Chavez, Katsuyoshi Takata, Christopher Rushton, Aixiang Jiang, Susana Ben-Neriah, Bruce W. Woolcock, Graham W. Slack, Eric D. Hsi, Jeffrey W. Craig, Laura K. Hilton, Sohrab P. Shah, Pedro Farinha, Anja Mottok, Randy D. Gascoyne, Ryan D. Morin, Kerry J. Savage, David W. Scott, Christian Steidl
Journal: Blood
Blood (2021) 138 (2): 136–148.
https://doi.org/10.1182/blood.2020007683
Published: 2021
Includes: Supplemental data
Journal Articles

Single Cell Profiling Reveals Unique CXCL13 Positive T Cell Subsets in the Tumor Microenvironment of Lymphocyte Rich Classic Hodgkin Lymphoma

Tomohiro Aoki, MD PhD, Lauren C. Chong, MSc, Katsuyoshi Takata, MD PhD, Katy Milne, Elizabeth Chavez, BSc, Cg RT, Tomoko Miyata-Takata, MD PhD, Susana Ben-Neriah, BSc, Doria Unrau, Adele Telenius, Merrill Boyle, BSc, Pedro Farinha, MD PhD, Andrew P. Weng, MD, Kerry J. Savage, MDMSc, David W. Scott, MBChB, PhD, Sohrab P Shah, Brad H. Nelson, Christian Steidl, MD
Journal: Blood
Blood (2020) 136 (Supplement 1): 32–33.
https://doi.org/10.1182/blood-2020-134929
Published: 2020
Journal Articles

Initial Whole Genome Sequencing of Plasma Cell Neoplasms in First Responders and Recovery Workers Exposed to the World Trade Center Attack of September 11, 2001

Benjamin Diamond, MD, Kylee H Maclachlan, FRACP,FRCPA, Andriy Derkach, PhD, Venkata Yellapantula, PhD, Even H Rustad, MD PhD, Malin Hultcrantz, MD PhD, Urvi A Shah, MD, Jessica Hong, Heather J Landau, MD, Christine Iacobuzio-Donahue, MD PhD, Elli Papaemmanuil, PhD, Shani I Irby, Laura Crowley, Michael Crane, Mayris Webber, David Goldfarb, M.P.H, Rachel Zeig-Owens, M.P.H, Orsi Giricz, PhD, Amit Verma, MBBS, David Prezant, MD, Ahmet Dogan, MD PhD, Sohrab P Shah, Yanming Zhang, MD, Ola Landgren, MD PhD, Francesco Maura, MD
Journal: Blood
Blood (2020) 136 (Supplement 1): 50–51.
https://doi.org/10.1182/blood-2020-136212
Published: 2020
Journal Articles

The Tumor Associated Antigen PRAME Exhibits Dualistic Functions That Are Targetable in Diffuse Large B-Cell Lymphoma

Katsuyoshi Takata, MD PhD, Lauren C. Chong, MSc, Daisuke Ennishi, MD PhD, Avinash Thakur, PhD, Shannon Healy, PhD, Elena Viganò, PhD, Tao Dao, MD PhD, Julie S Nielsen, Susana Ben-Neriah, BSc, Tomohiro Aoki, MD PhD, Ethan Tse, Stacy Hung, Michael Y. Li, BS, Merrill Boyle, BSc, Sung Soo Mun, Christopher Bourne, Bruce W Woolcock, Adele Telenius, Allen Zhang, Ali Bashashati, Saeed Saberi, Gianluca D' Antonio, Brad H Nelson, Sohrab P Shah, Pamela Hoodless, Ari Melnick, MD, Randy D. Gascoyne, MD, Joseph M Connors, MD, David A. Scheinberg, MD PhD, Wendy Béguelin, PhD, David W. Scott, MBChB, PhD, Christian Steidl, MD
Journal: Blood
Blood (2020) 136 (Supplement 1): 34.
https://doi.org/10.1182/blood-2020-141168
Published: 2020
Journal Articles

Single Cell Transcriptome Analysis Reveals Disease-Defining T Cell Subsets in the Tumor Microenvironment of Classic Hodgkin Lymphoma

Tomohiro Aoki, MD PhD, Lauren C. Chong, MSc, Katsuyoshi Takata, MD PhD, Katy Milne, Monirath Hav, PhD, Anthony Colombo, MS, Elizabeth Chavez, BSc, Cg RT, Tomoko Miyata-Takata, Vivian Lam, Chanel Ghesquiere, Daniel Kos, Talia Goodyear, Allen W. Zhang, Xuehai Wang, PhD, Saeed Saberi, Jiarui W. Ding, Pedro Farinha, MD PhD, Andrew P. Weng, MD PhD, Kerry J Savage, BSc, MD MSc, David W. Scott, MBChB, PhD, Gerald Krystal, PhD, Brad H. Nelson, Anja Mottok, MD PhD, Akil Merchant, MD, Sohrab P Shah, Christian Steidl, MD
Journal: Blood
Blood (2019) 134 (Supplement_1): 547.
https://doi.org/10.1182/blood-2019-121584
Published: 2019
Journal Articles

PRAME Expression Is Correlated with Treatment Outcome and Specific Features of the Tumor Microenvironment in Classical Hodgkin Lymphoma

Katsuyoshi Takata, MD PhD, Lauren C. Chong, MSc, Avinash Thakur, PhD, Tomohiro Aoki, MD PhD, Anja Mottok, MD PhD, Elizabeth Chavez, BSc, Cg RT, Pedro Farinha, MD PhD, Graham W Slack, MD, Pamela Hoodles, Sohrab P Shah, David W. Scott, MBChB, PhD, Christian Steidl, MD
Journal: Blood
Blood (2019) 134 (Supplement_1): 1509.
https://doi.org/10.1182/blood-2019-129730
Published: 2019
Journal Articles

The Double-Hit Gene Expression Signature Defines a Clinically and Biologically Distinct Subgroup within GCB-DLBCL

Daisuke Ennishi, MDPhD, Aixiang Jiang, M.Sc., Merrill Boyle, BSc, Brett Collinge, Bruno M. Grande, BSc, Susana Ben-Neriah, BSc, Graham W Slack, MD PhD, Pedro Farinha, MD PhD, Diego Villa, MD, Anja Mottok, Barbara Meissner, PhD, Saeed Saberi, Ali Bashashati, Kerry J Savage, BSc, MD MSc, Laurie H Sehn, MDMPH, Robert Kridel, PhD MD, Marco A. Marra, PhD, Sohrab P Shah, PhD, Christian Steidl, MD, Joseph M. Connors, MD, Randy D. Gascoyne, MD, Ryan D. Morin, PhDBSc,MSc, David W. Scott, PhDMD,FRACP,FRCPA
Journal: Blood
Blood (2018) 132 (Supplement 1): 921.
https://doi.org/10.1182/blood-2018-99-116827
Published: 2018
Journal Articles

Somatic PRAME Deletions Are Associated with Decreased Immunogenicity, Apoptosis Resistance and Poor Outcomes in Diffuse Large B-Cell Lymphoma

Katsuyoshi Takata, MD PhD, Daisuke Ennishi, MDPhD, Ali Bashashati, Saeed Saberi, Elena Viganò, PhD, Shannon Healy, PhD, Julie S Nielsen, Gianluca D' Antonio, Brad H Nelson, Sohrab P Shah, Joseph M Connors, Randy D. Gascoyne, MD, David W. Scott, PhDMD,FRACP,FRCPA, Christian Steidl, MD
Journal: Blood
Blood (2018) 132 (Supplement 1): 667.
https://doi.org/10.1182/blood-2018-99-113516
Published: 2018
Journal Articles

Molecular and Genetic Characterization of MHC Deficiency Identifies EZH2 As a Therapeutic Target for Restoring MHC Expression in Diffuse Large B-Cell Lymphoma

Daisuke Ennishi, MDPhD, Katsuyoshi Takata, MD PhD, Wendy Béguelin, PhD, Gerben Duns, PhD, Anja Mottok, Pedro Farinha, MD PhD, Ali Bashashati, David Scott, Merrill Boyle, BSc, Barbara Meissner, PhD, Susana Ben-Neriah, BSc, Bruce W Woolcock, Adele Telenius, Daniel Lai, Matthew R Teater, PhD, Robert Kridel, PhD MD, Kerry J Savage, BSc, MD MSc, Laurie H Sehn, MD MPH, Ryan D. Morin, PhD BSc MSc, Marco A. Marra, PhD, Sohrab P Shah, Joseph M. Connors, MD, Randy D. Gascoyne, MD, David W. Scott, PhD MD FRACP FRCPA, Ari M Melnick, MD, Christian Steidl, MD
Journal: Blood
Blood (2018) 132 (Supplement 1): 1560.
https://doi.org/10.1182/blood-2018-99-112010
Published: 2018
Journal Articles

Identification of Recurrent Non-Coding Driver Mutations in Non-Hodgkin Lymphomas through Integrative Genomic Analysis of 777 Patients

Aixiang Jiang, M.Sc., Bruno M. Grande, BSc, Sarah E Arthur, BSc, Miguel Alcaide, PhD, Daisuke Ennishi, MDPhD, Selin Jessa, Prasath Pararajalingam, B.Sc., Barbara Meissner, PhD, Merrill Boyle, BSc, Lauren Chong, MSc, Daniel Lai, Jordan Davidson, BSc, Anja Mottok, Kevin R Bushell, BSc, MSc, Laurie H. Sehn, MDMPH, Pedro Farinha, Sohrab P Shah, Andrew J. Mungall, PhD, Randy D. Gascoyne, MD, Marco A Marra, PhD, Christian Steidl, MD, Joseph M Connors, MD, David W. Scott, MD PhD FRACP, FRCPA, Ryan D. Morin, PhDBSc,MSc
Journal: Blood
Blood (2017) 130 (Supplement 1): 36.
https://doi.org/10.1182/blood.V130.Suppl_1.36.36
Published: 2017
Journal Articles

Genetic Characterization and Clinical Impact of Loss of MHC Class I and II Expression in De Novo Diffuse Large B-Cell Lymphoma

Daisuke Ennishi, MDPhD, Anja Mottok, Pedro Farinha, Fong Chun Chan, MSc, Ali Bashashati, Saeed Saberi, Barbara Meissner, PhD, Merrill Boyle, BSc, Susana Ben-Neriah, BSc, Robert Kridel, Kerry J Savage, BSc, MD MSc, Laurie H. Sehn, MDMPH, Ryan D. Morin, PhDBSc,MSc, Marco A Marra, PhD, Sohrab P Shah, Joseph M Connors, MD, Randy D. Gascoyne, MD, David W. Scott, MD PhD FRACP, FRCPA, Christian Steidl, MD
Journal: Blood
Blood (2017) 130 (Supplement 1): 40.
https://doi.org/10.1182/blood.V130.Suppl_1.40.40
Published: 2017
Journal Articles

Genetic profiling of MYC and BCL2 in diffuse large B-cell lymphoma determines cell-of-origin–specific clinical impact

Daisuke Ennishi, Anja Mottok, Susana Ben-Neriah, Hennady P. Shulha, Pedro Farinha, Fong Chun Chan, Barbara Meissner, Merrill Boyle, Christoffer Hother, Robert Kridel, Daniel Lai, Saeed Saberi, Ali Bashashati, Sohrab P. Shah, Ryan D. Morin, Marco A. Marra, Kerry J. Savage, Laurie H. Sehn, Christian Steidl, Joseph M. Connors, Randy D. Gascoyne, David W. Scott
Journal: Blood
Blood (2017) 129 (20): 2760–2770.
https://doi.org/10.1182/blood-2016-11-747022
Published: 2017
Includes: Supplemental data
Journal Articles

Targeted Sequencing Reveals Novel Gene Mutations Associated with Transformation and Early Progression in Follicular Lymphoma

Robert Kridel, Fong Chun Chan, Anja Mottok, Merrill Boyle, Pedro Farinha, King Tan, Barbara Meissner, Ali Bashashati, Susana Ben-Neriah, Eva Gine, Daisuke Ennishi, Andrew J. Mungall, Ryan D. Morin, Nathalie A. Johnson, Laurie H. Sehn, Thomas Tousseyn, Ahmet Dogan, Joseph M. Connors, David W. Scott, Christian Steidl, Marco A. Marra, Randy D. Gascoyne, Sohrab P. Shah
Journal: Blood
Blood (2016) 128 (22): 2919.
https://doi.org/10.1182/blood.V128.22.2919.2919
Published: 2016
Journal Articles

Divergent Modes of Tumor Evolution Underlie Histological Transformation and Early Progression of Follicular Lymphoma

Fong Chun Chan, Robert Kridel, Anja Mottok, Merrill Boyle, Pedro Farinha, King Tan, Barbara Meissner, Ali Bashashati, Andrew McPherson, PhD, Andrew Roth, PhD, Karey Shumansky, Damian Yap, PhD, Susana Ben-Neriah, Jamie Rosner, Maia A. Smith, Cydney Nielsen, PhD, Adele Telenius, Daisuke Ennishi, Andrew J. Mungall, Richard Moore, PhD, Ryan D. Morin, Nathalie A. Johnson, Laurie H Sehn, MD, Joseph M. Connors, David W Scott, MBChB, PhD, Christian Steidl, Marco A. Marra, PhD, Randy D Gascoyne, MD, Sohrab P. Shah
Journal: Blood
Blood (2016) 128 (22): 1091.
https://doi.org/10.1182/blood.V128.22.1091.1091
Published: 2016
Journal Articles

A Novel Prognostic Model Based on Tumor Microenvironment Biology in Relapse Biopsies Predicts Post-Autologous Stem Cell Transplantation Outcomes in Classical Hodgkin Lymphoma

Fong Chun Chan, Anja Mottok, Alina S Gerrie, MD, Maryse M Power, MD, Kerry J Savage, MD, Marcel Nijland, MD, Arjan Diepstra, MD PhD, Anke Van den Berg, PhD, Joseph M. Connors, Randy D. Gascoyne, Sohrab P. Shah, David W. Scott, Christian Steidl
Journal: Blood
Blood (2016) 128 (22): 1093.
https://doi.org/10.1182/blood.V128.22.1093.1093
Published: 2016
Journal Articles

Frequent Genetic Alterations of PI3K-AKT Pathway and Their Clinical Significance in Germinal Center B-Cell-like Diffuse Large B-Cell Lymphoma

Daisuke Ennishi, Ali Bashashati, Saeed Saberi, Anja Mottok, Barbara Meissner, Merrill Boyle, Susana Ben-Neriah, Robert Kridel, David Dominguez-Sola, MD PhD, Kerry J Savage, MD, Laurie H Sehn, MD, Joseph M. Connors, Ryan D. Morin, Marco A. Marra, PhD, Sohrab P. Shah, Christian Steidl, MD, David W. Scott, Randy D Gascoyne, MD
Journal: Blood
Blood (2016) 128 (22): 607.
https://doi.org/10.1182/blood.V128.22.607.607
Published: 2016
Journal Articles

Cell of origin of transformed follicular lymphoma

Robert Kridel, Anja Mottok, Pedro Farinha, Susana Ben-Neriah, Daisuke Ennishi, Yvonne Zheng, Elizabeth A. Chavez, Hennady P. Shulha, King Tan, Fong Chun Chan, Merrill Boyle, Barbara Meissner, Adele Telenius, Laurie H. Sehn, Marco A. Marra, Sohrab P. Shah, Christian Steidl, Joseph M. Connors, David W. Scott, Randy D. Gascoyne
Journal: Blood
Blood (2015) 126 (18): 2118–2127.
https://doi.org/10.1182/blood-2015-06-649905
Published: 2015
Includes: Supplemental data