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Journal Articles

Live-cell pick-seq (LiP-Seq): Interrogating ultra-rare Mantle Cell Lymphoma MRD after CD19-targeted CAR T-cell therapy

Free
Ran Xu, Gongwei Wu, Siobhan Rice, Jenalyn Weekes, Yifei Gao, Ajit Nirmal, Huiyun Liu, Zoe Ciantra, Qingyu Luo, Amanda Fortune, Karley Whalen, Abner Louissaint, Joshua Nordberg, Jia-Ren Lin, Michael Hemann, Scott Manalis, Philippe Armand, Eric Smith, Caron Jacobson, Mark Murakami, Peter Sorger, David Weinstock, Li Song, Andrew Lane
Journal: Blood
Blood (2025) 146 (Supplement 1): 940.
https://doi.org/10.1182/blood-2025-940
Published: 2025
Journal Articles

ALK+ LBCL and PBL share a similar plasmablastic transcriptional identity but show divergent signaling dependencies and therapeutic vulnerabilities

Free
Jessica Duffy, Anna Rider, Derek Loneman, Devang Thakkar, Genna Mullen, Gail Newton, Raymond Alvarado, Bomin Ku, Shuze Wang, Veronica Russell, Yuxin Chen, James Townsend, Haley Martin, Shannon Harkins, Catherine Cho, Rex Au-Yeung, Amy Chadburn, Chee Leong Cheng, Magdalena Czader, Emily F. Mason, Andrew Evans, Yuri Fedoriw, Jean Koff, Kikkeri N Naresh, Sarah Ondrejka, Mette Pedersen, Jacob Soumerai, Christopher Ott, Wilfredo Garcia-Beltran, Sandeep Dave, Abner Louissaint
Journal: Blood
Blood (2025) 146 (Supplement 1): 51.
https://doi.org/10.1182/blood-2025-51
Published: 2025
Journal Articles

Genomic and transcriptomic landscape of extranodal marginal zone lymphoma

Free
Izidore S. Lossos, Leo Biral, Devang Thakkar, Kikkeri N Naresh, Sarah Ondrejka, Eric Hsi, Mina Xu, Jean Koff, David Jaye, Peter Nørgaard, Marie Fredslund Breinholt, Rebecca Leeman-Neill, Jennifer Shingleton, Lanie Happ, Cassandra Love, Emily F. Mason, Abner Louissaint, Choon Kiat Ong, Chee Leong Cheng, Raju Pillai, Mette Pedersen, C. Cameron Yin, Rex Au-Yeung, Marja-Liisa Karjalainen-Lindsberg, Amy Chadburn, Matthew McKinney, Payal Sojitra, Andrew Evans, Magdalena Czader, Yan Jiong, Sandeep Dave, Jennifer Chapman
Journal: Blood
Blood (2025) 146 (Supplement 1): 1761.
https://doi.org/10.1182/blood-2025-1761
Published: 2025
Journal Articles

Novel immune gene expression signature risk-stratifies Mantle Cell Lymphoma outcomes independent of TP53 status

Free
Jean Koff, Veronica Russell, Rachel Kositsky, David Jaye, Michael Churnetski, Katelin Baird, Colin O'Leary, Christopher Flowers, Sirpa Leppä, Shaoying Li, Jessie Xu, Mette Pedersen, Anne Ortved Gang, Kikkeri N Naresh, Rex Au-Yeung, Jennifer Chapman, Amy Chadburn, Izidore S. Lossos, Sarah Ondrejka, Abner Louissaint, Eric Tse, Cassandra Love, Devang Thakkar, Clayton Parker, Choon Kiat Ong, Andrew Evans, Emily F. Mason, Yan Jiong, Magdalena Czader, Andrew Evens, Dina Soliman, Yuri Fedoriw, Sandeep Dave, Jonathon Cohen
Journal: Blood
Blood (2025) 146 (Supplement 1): 352.
https://doi.org/10.1182/blood-2025-352
Published: 2025
Journal Articles

Relapsed diffuse large B-cell lymphoma is shaped by molecular subtypes and genomic alterations

Free
Eleonora Calabretta, Xuan Zhao, Chip Stewart, Jennifer Crombie, Marianna Palazzo, Tianfang Ma, Audrey Li, Jean-Baptiste Alberge, Kyle Wright, Scott Rodig, Richard Burack, Patrick Reagan, David Meredith, Lakshmi Nayak, Abner Louissaint, Alex Herrera, Joo Song, Björn Chapuy, Xavi Loinaz, Geoffrey Shouse, Philip Rock, Carmelo Carlo-Stella, Gad Getz, Margaret Shipp
Journal: Blood
Blood (2025) 146 (Supplement 1): 349.
https://doi.org/10.1182/blood-2025-349
Published: 2025
Journal Articles

Novel Plasma Cell-Free RNA-Based Liquid Biopsy Approach for CLL

Free
Anastasia Radko, Taekyoung Kwak, Andrey V Shubin, Ilya E. Krauz, Aleksandr Zaitsev, Anastasiia G Tarabarova, Maria Savchenko, Mark Meerson, Evgenii S Bolshakov, Diana Lupova, Nika Lugovykh, Daniil Nikitin, Tatiana Pashkovskaia, Nicholas R. Merriam, Mary N Abdou, Irina Zheleznyak, Kseniia L Markova, Anna Kersilova, Anastasiya Yudina, Boris Shpak, Anna Kamysheva, Anastasiya Terenteva, Nathan Fowler, Anna B Rider, Abner Louissaint, Jr., Michael G Goldberg
Journal: Blood
Blood (2024) 144 (Supplement 1): 3610.
https://doi.org/10.1182/blood-2024-205248
Published: 2024
Journal Articles

Novel Cell Lines Identify Cell-Intrinsic and Targetable Features of Angioimmunoblastic T-Cell Lymphoma

Free
Alexis Mottram, Michelle Ramseier, Yuen-Yi (Moony) Tseng, Abner Louissaint, Samuel Ng
Journal: Blood
Blood (2024) 144 (Supplement 1): 6246.
https://doi.org/10.1182/blood-2024-203759
Published: 2024
Journal Articles

Hi-C Allows Genome-Wide Characterization of Enhancer-Driven Oncogene Rearrangements in Formalin-Fixed Lymphoid Cancer Biopsies

Free
Jamin Wu, Alec Chu, Jang Cho, Misha Movahed-Ezazi, Kristyn Galbraith, Chanel Schroff, Yiying Yang, Jon-Matthew Belton, Valentina Nardi, Abner Louissaint, Dennis Shasha, Tatyana Gindin, Minji Kim, Marcin P Cieslik, Anthony Schmitt, Matija Snuderl, Russell J. H. Ryan
Journal: Blood
Blood (2024) 144 (Supplement 1): 4973.
https://doi.org/10.1182/blood-2024-201614
Published: 2024
Journal Articles

SEC62 Regulates HLA-E Expression in Diffuse Large B-Cell Lymphoma to Function As a Mechanism of Immune Evasion

Free
Cynthia K. Hahn, Gavin E. Hooper, Alexandra Forman, Gabriela Brunsting Hoffmann, Sam Sadigh, Kun Huang, Erin M. Parry, John G. Doench, Jeremy M. Simon, Abner Louissaint, Catherine J. Wu
Journal: Blood
Blood (2024) 144 (Supplement 1): 335.
https://doi.org/10.1182/blood-2024-210613
Published: 2024
Journal Articles

Unraveling the Transcriptional Landscape of Nodular Lymphocyte-Predominant Hodgkin Lymphoma and T-Cell/Histiocyte Rich Large B-Cell Lymphoma: Impact of Tumor Microenvironment and Checkpoint Gene Expression

Free
Ilja Kalashnikov, Veronica Russell, Panu Kovanen, Johannes Dunkel, Marja-Liisa Karjalainen-Lindsberg, Annika Pasanen, Rachel Kositsky, Sarah L. Ondrejka, Tanu Goyal, Eric D. Hsi, Mette Ølgod Pedersen, Anne Ortved Gang, Magdalena Czader, Jiehao Zhou, Mina Xu, Nathan Paulson, Jean L. Koff, Andrew G Evans, Yasodha Natkunam, Ridas Juskevicius, Abner Louissaint, Elizabeth Thacker, Tushar Dave, Cassandra L. Love, Chad M McCall, Choon Kiat Ong, Michael Churnetski, Haley Martin, Jennifer R. Chapman-Fredricks, Javeed Iqbal, Amy Chadburn, Payal Sojitra, Amir Behdad, William Choi, Jie Xu, Emily F. Ferguson Mason, Kikkeri N Naresh, Yuri D. Fedoriw, Dina Sameh Soliman, Sandeep Dave, Sirpa Leppä
Journal: Blood
Blood (2023) 142 (Supplement 1): 176.
https://doi.org/10.1182/blood-2023-182294
Published: 2023
Journal Articles

Genome-Scale High-Resolution Spatial Mapping of the Pro-Tumorigenic Cellular Niche in Classic Hodgkin Lymphoma

Free
Vignesh Shanmugam, Neriman Tokcan, Daniel Chafamo, Sean Sullivan, Haley Martin, Gail A Newton, Mehdi Borji, Naeem Nadaf, Irving Barrera, Dylan Cable, Jackson Weir, Orr Ashenberg, Caroline Uhler, Geraldine Pinkus, Scott Rodig, Margaret A. Shipp, Evan Macosko, Abner Louissaint, Fei Chen, Todd R. Golub
Journal: Blood
Blood (2023) 142 (Supplement 1): 175.
https://doi.org/10.1182/blood-2023-185522
Published: 2023
Journal Articles

Lysosomal Membrane Permeabilization Sensitizes Ctss-Hyperactive Tumors to BCL2-Targeting Therapies

Free
Johannes Adrian Hildebrand, Sarah Haebe, Verena Passerini, Michael Heide, William Keay, Louisa Adolph, Lukas Ulrich, Natyra Tahiri, Raphael Koch, Jessica Duffy, Haley Martin, Liam Hackett, Jeremy Zhang, Christina Ludwig, Stefanie Wilhelm, Björn Häupl, Carmen Doebele, Michael von Bergwelt-Baildon, Axel Lechner, Tobias Herold, Christian Kellner, Martina Rudelius, Thomas Oellerich, Marc Schmidt-Supprian, Abner Louissaint, Matthew S Davids, Oliver Weigert
Journal: Blood
Blood (2023) 142 (Supplement 1): 4358.
https://doi.org/10.1182/blood-2023-174384
Published: 2023
Journal Articles

Nodular Lymphocyte Predominant Hodgkin Lymphoma with Splenic Involvement Is Characterized By Inflamed Tumor Microenvironment, High Expression of Checkpoint Molecule Gene-Signature and Adverse Outcome

Free
Ilja Kalashnikov, Marja-Liisa Karjalainen-Lindsberg, Panu Kovanen, Johannes Dunkel, Annika Pasanen, Rachel Kositsky, Sarah L. Ondrejka, Eric D. Hsi, Andrew G Evans, Mette Ø Pedersen, Peter H. Norgaard, Anne Ortved Gang, Magdalena Czader, Jiehao Zhou, Mina L Xu, Nathan Paulson, Ridas Juskevicius, Yasodha Natkunam, Abner Louissaint, Jr., Haley Martin, Elizabeth Thacker, Cassandra Love, Shari Tian, Choon Kiat Ong, Chee Leong Cheng, Chad M. McCall, Jean L. Koff, Sheren F. Younes, Mary Ann Arildsen, Jennifer R Chapman-Fredricks, Catalina Amador, Yuri Fedoriw, Carla Casulo, Amy Chadburn, Payal Sojitra, Amir Behdad, Eric Tse, Kikkeri N Naresh, C. Cameron Yin, Rashmi S. Goswami, Sandeep Dave, Sirpa Leppa
Journal: Blood
Blood (2022) 140 (Supplement 1): 3559–3561.
https://doi.org/10.1182/blood-2022-169476
Published: 2022
Journal Articles

TP63 Fusions Drive Enhancer Rewiring, Lymphomagenesis, and Dependence on EZH2

Free
Gongwei Wu, Noriaki Yoshida, Jihe Liu, Xiaoyang Zhang, Tayla B. Heavican-Foral, Huiyun Liu, Geoffrey M. Nelson, Lu Yang, Renee Chen, Marcus Kenneth Jones, Ran Xu, Ajit Johnson Nirmal, Salvia Jain, Catharine Leahy, Kristen Lynn Jones, Kristen E. Stevenson, Wenchao Wu, Abner Louissaint, Jr., Lydie Debaize, Wing C. Chan, Shannan Ho Sui, Samuel Ng, Andrew L. Feldman, Matthew Meyerson, Karen Adelman, chun-Wei David Chen, Myles Brown, David M. Weinstock
Journal: Blood
Blood (2022) 140 (Supplement 1): 1696–1697.
https://doi.org/10.1182/blood-2022-163368
Published: 2022
Journal Articles

Mutations of ATM Confer a Risk of Inferior Survival in Patients with TP53- wild Type Mantle Cell Lymphoma

Free
Jean L. Koff, Rachel Kositsky, David L Jaye, Michael C. Churnetski, Katelin Baird, Colin B. O'Leary, Christopher R. Flowers, Sirpa Leppa, Marja-Liisa Karjalainen-Lindsberg, Shaoying Li, Jie Xu, Mette Ø Pedersen, Anne Ortved Gang, Kikkeri N Naresh, Rebecca J Leeman-Neill, Kwok Him Rex Au Yeung, Hina Naushad Qureishi, Javeed Iqbal, Jennifer R Chapman-Fredricks, Chad M. McCall, Michael Crump, Amy Chadburn, Erin C. Mulvey, Izidore S. Lossos, Sandra L. Ondrejka, Eric D. Hsi, Abner Louissaint, Jr., Haley Martin, Eric Tse, Cassandra Love, Tushar Dave, Clay Parker, Choon Kiat Ong, Andrew G Evans, Amir Behdad, Lixin Yang, Nishitha Reddy, Mary Ann Arildsen, Ridas Juskevicius, Jiong Yan, Magdalena Czader, Andrew M. Evens, Dina Sameh Soliman, Yuri Fedoriw, Sandeep S. Dave, Jonathon B. Cohen
Journal: Blood
Blood (2022) 140 (Supplement 1): 3500–3503.
https://doi.org/10.1182/blood-2022-168002
Published: 2022
Journal Articles

KLRG1 Depletion Is a Novel Therapeutic Strategy for Patients with Mature T and NK/T-Cell Lymphomas

Free
Bimarzhan Assatova, Christopher Trevisani, Robert Willim, Jessica Duffy, Abner Louissaint, Jr., Won-Seog Kim, David J Feith, Thomas Loughran, Jr., Foster Powers, Elizabeth A Morgan, Lei Yang, Brandy Pinckney, Garrett Haskett, Matthew J Cotton, Andrew Crabbe, Jessica Beth Ziemba, Ian Brain, Tayla B. Heavican-Foral, Nora Scanlan, Gail Newton, Jaehyuk Choi, Jeffrey A Barnes, Patrick Connor Johnson, Eric D Jacobsen, Steven Greenberg, David M. Weinstock, Salvia Jain
Journal: Blood
Blood (2022) 140 (Supplement 1): 2253–2255.
https://doi.org/10.1182/blood-2022-162583
Published: 2022
Journal Articles

Extranodal Marginal Zone Lymphomas Show Recurrent Mutations in DNA Repair Genes, Cancer-Associated Proliferative Signaling and NOTCH1 Signaling Pathways, Regardless of Anatomic Site

Free
Jennifer R Chapman-Fredricks, Devang Thakkar, Juan Pablo Alderuccio, Kikkeri N Naresh, Sarah L. Ondrejka, Eric D. Hsi, Mina L Xu, Nathan Paulson, Jean L. Koff, David L Jaye, Jonathon B. Cohen, Anne Ortved Gang, Rebecca J Leeman-Neill, Tushar Dave, Lanie Happ, Cassandra Love, Sasan Zandi, Hina Naushad, Emily F Mason, Abner Louissaint, Jr., Haley Martin, Choon Kiat Ong, Raju Pillai, Mette Ø Pedersen, C. Cameron Yin, William Choi, Rex Kwok Him Au-Yeung, Marja-Liisa Karjalainen-Lindsberg, Amy Chadburn, Vincent Sarno, Matthew McKinney, Payal Sojitra, Andrew G Evans, Amir Behdad, Carlos Galvez, Chee Leong Cheng, Magdalena Czader, Jiong Yan, Sandeep S. Dave, Izidore S. Lossos
Journal: Blood
Blood (2022) 140 (Supplement 1): 6378–6380.
https://doi.org/10.1182/blood-2022-165616
Published: 2022
Journal Articles

A Machine-Learning Derived Red Blood Cell Morphology Tool Enables Differential Diagnosis and Novel Single-Cell Analyses

Free
Brody Foy, Jonathan Stefely, Pavan K. Bendapudi, Robert P. Hasserjian, Hanny Al-Samkari, Abner Louissaint, Jr., Megan J Fitzpatrick, Bailey Hutchison, Christopher Mow, Julia Collins, Hasmukh P. Patel, Chhaya Patel, Nikita Patel, Samantha Ho, Richard M Kaufman, Walter Dzik, John M. Higgins, Robert S Makar
Journal: Blood
Blood (2022) 140 (Supplement 1): 10704–10705.
https://doi.org/10.1182/blood-2022-170422
Published: 2022
Journal Articles

Next-generation ALK inhibitors are highly active in ALK-positive large B-cell lymphoma

Free
Clinical Trials & Observations
Jacob D. Soumerai, Allison Rosenthal, Shannon Harkins, Jessica Duffy, Carmen Mecca, Yingbing Wang, Ravinder K. Grewal, Areej R. El-Jawahri, Huiyun Liu, Cedric Menard, Ahmet Dogan, Lei Yang, Lisa M. Rimsza, Kurt Bantilan, Haley Martin, Matthew Lei, Sydney Mohr, Anna Kurilovich, Olga Kudryashova, Ekaterina Postovalova, Valentina Nardi, Jeremy S. Abramson, Roberto Chiarle, Andrew D. Zelenetz, Abner Louissaint, Jr.
Journal: Blood
Blood (2022) 140 (16): 1822–1826.
https://doi.org/10.1182/blood.2022015443
Published: 2022
Includes: Multimedia, Supplemental data
Journal Articles

The Atlas of Blood Cancer Genomes (ABCG) Project: A Comprehensive Molecular Characterization of Leukemias and Lymphomas

Free
Cassandra Love, Raju Pillai, Sarah L. Ondrejka, Govind Bhagat, Amy Chadburn, Matthew McKinney, Jean L. Koff, Dina Sameh Soliman, Magdalena Czader, Abner Louissaint, Jr., Shaoying Li, Choon Kiat Ong, Amir Behdad, Andrew M. Evens, Yasodha Natkunam, Peter H. Norgaard, Sirpa Leppa, Eric Tse, Jennifer R Chapman, Catalina Amador, Yuri Fedoriw, Agata M. Bogusz, Andrew G Evans, Rashmi S. Goswami, Ridas Juskevicius, Mina L. Xu, Kikkeri N Naresh, Barbara Xiong, Adam Snowden, Anabel Thurman, Eileen Smith, Tushar Dave, Rachel Kositsky, Devang Thakkar, Veronica Russell, Caroline J Roth, Sandeep Dave
Journal: Blood
Blood (2021) 138 (Supplement 1): 2213.
https://doi.org/10.1182/blood-2021-151346
Published: 2021