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Journal Articles

Acute myeloid leukemias with UBTF tandem duplications are sensitive to menin inhibitors

Juan M. Barajas, Milad Rasouli, Masayuki Umeda, Ryan Hiltenbrand, Sherif Abdelhamed, Rebecca Mohnani, Bright Arthur, Tamara Westover, Melvin E. Thomas, III, Minoo Ashtiani, Laura J. Janke, Beisi Xu, Ti-Cheng Chang, Wojciech Rosikiewicz, Emily Xiong, Chandra Rolle, Jonathan Low, Reethu Krishan, Guangchun Song, Michael P. Walsh, Jing Ma, Jeffrey E. Rubnitz, Ilaria Iacobucci, Taosheng Chen, Anja Krippner-Heidenreich, Christian M. Zwaan, Olaf Heidenreich, Jeffery M. Klco
Journal: Blood
Blood (2024) 143 (7): 619–630.
https://doi.org/10.1182/blood.2023021359
Published: 2024
Includes: Supplemental data
Journal Articles

UBTF Tandem Duplications in Pediatric MDS and AML: Implications for Clinical Screening and Diagnosis

Juan Barajas, Masayuki Umeda, Jing Ma, Mahsa Khanlari, Michael P Walsh, Tamara Westover, Lisett Contreras, Guangchun Song, Xiaotu Ma, Melvin Thomas, III, Jeffery M. Klco
Journal: Blood
Blood (2023) 142 (Supplement 1): 838.
https://doi.org/10.1182/blood-2023-172765
Published: 2023
Journal Articles

The Relapse Mechanisms and Genomic Landscape Differ in KMT2A -r Pediatric Leukemia in Relation to Relapse Time

Louise Ahlgren, Mattias Pilheden, Helena Sturesson, Varsha Singh, Qirui Zhang, Michael Walsh, Guangchun Song, Anders Castor, Cornelis Jan Pronk, Pauline Schneider, Ronald W. Stam, Gisela Barbany, Katja Pokrovskaja Tamm, Jonas Abrahamsson, Linda Fogelstrand, Olli Lohi, Jing Ma, Jinghui Zhang, Anna K. Hagstroem-Andersson
Journal: Blood
Blood (2023) 142 (Supplement 1): 2978.
https://doi.org/10.1182/blood-2023-185044
Published: 2023
Journal Articles

Gene Expression Machine Learning Models Classify Pediatric AML Subtypes with High Performance

Krish Shah, Jing Ma, Mohamed Djekidel, Guangchun Song, Masayuki Umeda, Yiping Fan, Gang Wu, Jeffery Klco
Journal: Blood
Blood (2023) 142 (Supplement 1): 1570.
https://doi.org/10.1182/blood-2023-189450
Published: 2023
Journal Articles

Genetic and Functional Characterization of NUP98 -Rearranged Leukemia

Masayuki Umeda, Nicole Michmerhuizen, Ryan Hiltenbrand, Juan Barajas, Bright Arthur, Michael P Walsh, Guangchun Song, Jing Ma, Tamara Westover, Cristina Mecucci, Danika Di Giacomo, Franco Locatelli, Riccardo Masetti, Salvatore Bertuccio, Martina Pigazzi, Ilaria Iacobucci, Charles G. Mullighan, Jeffery M. Klco
Journal: Blood
Blood (2023) 142 (Supplement 1): 1562.
https://doi.org/10.1182/blood-2023-184622
Published: 2023
Journal Articles

The Rise and Fall of Leukemia Clones in Longitudinal Samples from Diagnosis to Relapse in KMT2A- rearranged Infant and Childhood Leukemia

Louise Ahlgren, Mattias Pilheden, Helena Sturesson, Varsha Singh, Qirui Zhang, Anders Castor, Cornelis Jan Pronk, Gisela Barbany, Katja Pokrovskaja Tamm, Linda Fogelstrand, Michael P Walsh, Guangchun Song, Jinghui Zhang, Jing Ma, Anna Hagstroem-Andersson
Journal: Blood
Blood (2022) 140 (Supplement 1): 9189–9190.
https://doi.org/10.1182/blood-2022-165869
Published: 2022
Journal Articles

Tracking Clonal Evolution in Pediatric AML

Anna LW Huskey, Pandurang Kolekar, Tamara Westover, Jing Ma, Michael P Walsh, Masayuki Umeda, Guangchun Song, Yanling Liu, Quang Tran, Xiaotu Ma, Jeffery M. Klco
Journal: Blood
Blood (2022) 140 (Supplement 1): 8686–8687.
https://doi.org/10.1182/blood-2022-167256
Published: 2022
Journal Articles

Integrated Genomic Analysis Identifies UBTF Tandem Duplications As a Subtype-Defining Lesion in Pediatric Acute Myeloid Leukemia

Masayuki Umeda, Jing Ma, Benjamin J. Huang, Kohei Hagiwara, Tamara Westover, Sherif Abdelhamed, Juan Martin Barajas, Melvin Edward Thomas, III, Michael P Walsh, Guangchun Song, Liqing Tian, Yanling Liu, Xiaolong Chen, Pandurang Kolekar, Quang Tran, Scott Foy, Jamie L. Maciaszek, Andrew B Kleist, Amanda R. Leonti, Bensheng Ju, John Easton, Huiyun Wu, Virginia Valentine, Marc Valentine, Yen-Chun Liu, Rhonda E. Ries, Jenny L. Smith, Evan Parganas, Ilaria Iacobucci, Ryan Hiltenbrand, Jonathan Miller, Jason Myers, Evadnie Rampersaud, Delaram Rahbarinia, Michael Rusch, Gang Wu, Hiroto Inaba, Yi-Cheng Wang, Todd A. Alonzo, James R. Downing, Charles G. Mullighan, Stanley B Pounds, M. Madan Babu, Jinghui Zhang, Jeffrey E. Rubnitz, Soheil Meshinchi, Xiaotu Ma, Jeffery M. Klco
Journal: Blood
Blood (2021) 138 (Supplement 2): LBA-4.
https://doi.org/10.1182/blood-2021-155134
Published: 2021
Journal Articles

The Molecular Landscape of KMT2A -Rearranged Leukemia from Infancy to Adulthood Reveals Age and Leukemia-Specific Mutational Patterns

Mattias Pilheden, Ton Falqués, Louise Ahlgren, Helena Sturesson, Michael P Walsh, Guangchun Song, Anders Castor, Cornelis Pronk, Hanne Vibeke Marquart, Birgitte Lausen, Gisela Barbany, Katja Pokrovskaja Tamm, Ullrika Norén-Nyström, Linda Fogelstrand, Olli Lohi, Axel Hyrenius Wittsten, Jinghui Zhang, James R. Downing, Jing Ma, Anna Hagstroem-Andersson
Journal: Blood
Blood (2021) 138 (Supplement 1): 3479.
https://doi.org/10.1182/blood-2021-152082
Published: 2021
Journal Articles

The Role of ETO and CtBP1 in CBFA2T3-GLIS2 Mediated Transcriptional Regulation and Leukemogenesis

Elizabeth A. R. Garfinkle, Anitria Cotton, Pratima Nallagatla, Jing Ma, Guangchun Song, Sharnise Mitchell, Taylor Wilson, Jinjun Dang, Tanja Andrea Gruber
Journal: Blood
Blood (2021) 138 (Supplement 1): 3307.
https://doi.org/10.1182/blood-2021-151634
Published: 2021
Journal Articles

Integrative Analysis of Pediatric Acute Leukemia Identifies Immature Subtypes That Span a T Lineage and Myeloid Continuum with Distinct Prognoses

Tanja A. Gruber, MD PhD, Jing Ma, PhD, Sanne Noort, MD MSc, Yu Liu, PhD, Michael P Walsh, PhD, Stephanie Nance, PhD, Yanling Liu, PhD, Yuanyuan Wang, PhD, Guangchun Song, PhD, Tamara Lamprecht, BS, John Easton, PhD, Martina Pigazzi, PhD, Marie Jarosova, PhD, Kelaidi Charikleia, MD, Jeffrey Rubnitz, MD PhD, Dirk Reinhardt, MD, Marry M. van den Heuvel-Eibrink, Prof, MD PhD, Franco Locatelli, MD PhD, Henrik Hasle, Jeffery M. Klco, MD PhD, James R. Downing, MD, Stanley Pounds, PhD, Jinghui Zhang, PhD, Christian Michel Zwaan, MD PhD, Maarten Fornerod, PhD
Journal: Blood
Blood (2019) 134 (Supplement_1): 918.
https://doi.org/10.1182/blood-2019-127411
Published: 2019
Journal Articles

Assessing the Subclonal Genetic Landscape of KMT2A -Rearranged Infant Acute Lymphoblastic Leukemia By Single-Cell Genomics

Mattias Pilheden, MSc, Axel Hyrenius Wittsten, MSc, Veronica Gonzalez-Pena, PhD, Helena Sturesson, PhD, Michael P Walsh, PhD, Guangchun Song, PhD, Hanne Vibeke Marquart, MD PhD, Birgitte Lausen, MD PhD, Anders Castor, MD PhD, Jinghui Zhang, PhD, James R. Downing, MD, Jing Ma, PhD, Charles Gawad, MD PhD, Anna K. Andersson, PhD
Journal: Blood
Blood (2017) 130 (Supplement 1): 2709.
https://doi.org/10.1182/blood.V130.Suppl_1.2709.2709
Published: 2017
Journal Articles

Activating Mutations Are Potent Pro-Leukemic Mediators in Murine MLL-MLLT3 Leukemia That Cause Distinct Transcriptional Profiles

Axel Hyrenius-Wittsten, MSc, Helena Sturesson, PhD, Michael P. Walsh, PhD, Jenny Hansson, PhD, Julhash U. Kazi, PhD, Mattias Pilheden, MSc, Stephanie Nance, Pankaj Gupta, Guangchun Song, PhD, Jinghui Zhang, PhD, Jing Ma, PhD, Tanja A. Gruber, MD PhD, James R. Downing, MD PhD, Anna K. Andersson, PhD
Journal: Blood
Blood (2016) 128 (22): 3918.
https://doi.org/10.1182/blood.V128.22.3918.3918
Published: 2016
Journal Articles

Outcome of children with hypodiploid ALL treated with risk-directed therapy based on MRD levels

Clinical Trials & Observations
Charles G. Mullighan, Sima Jeha, Deqing Pei, Debbie Payne-Turner, Elaine Coustan-Smith, Kathryn G. Roberts, Esmé Waanders, John K. Choi, Xiaotu Ma, Susana C. Raimondi, Yiping Fan, Wenjian Yang, Guangchun Song, Jun J. Yang, Hiroto Inaba, James R. Downing, Wing H. Leung, W. Paul Bowman, Mary V. Relling, William E. Evans, Jinghui Zhang, Dario Campana, Ching-Hon Pui
Journal: Blood
Blood (2015) 126 (26): 2896–2899.
https://doi.org/10.1182/blood-2015-09-671131
Published: 2015
Journal Articles

Genomic Landscape of Relapsed Acute Lymphoblastic Leukemia

Esmé Waanders, PhD, Stephanie M Dobson, MSc, Xiaotu Ma, PhD, Debbie Payne-Turner, BS, Guangchun Song, PhD, Yiping Fan, Zhaohui Gu, PhD, Ying Shao, Michael Rusch, BA, Kelly McCastlain, BS, Ilaria Iacobucci, PhD, Kathryn G. Roberts, Shann-Ching Chen, PhD, Pankaj Gupta, Ji Wen, Gang Wu, PhD, Jing Ma, PhD, Colin Bailey, Matthew Lear, Scott Olsen, Deanna Naeve, Geoffrey A. Neale, PhD, John Easton, PhD, Sima Jeha, MD, Ching-Hon Pui, MD, James R. Downing, MD, William E. Evans, PharmD, Mary V. Relling, PharmD, Jun J Yang, PhD, John E. Dick, PhD, Jinghui Zhang, PhD, Charles G. Mullighan, MBBS, MSc, MD
Journal: Blood
Blood (2015) 126 (23): 692.
https://doi.org/10.1182/blood.V126.23.692.692
Published: 2015
Journal Articles

Expression of an Oncogenic ERG isoform Characterizes a Distinct Subtype of B-Progenitor Acute Lymphoblastic Leukemia

Jinghui Zhang, PhD, Kelly McCastlain, Chunxu Qu, PhD, Gang Wu, PhD, Michael Edmonson, PhD, Yongjin Li, PhD, Lei Wei, PhD, Debbie Payne-Turner, BS, Hiroki Yoshihara, MDPhD, Michelle L. Churchman, PhD, Esmé Waanders, PhD, Panagiotis Ntziachristos, PhD, Iannis Aifantis, PhD, Kathryn G. Roberts, Jing Ma, PhD, Guangchun Song, PhD, John Easton, PhD, Heather L. Mulder, BS, Xiang Chen, PhD, Michael Rusch, BA, Kristy Boggs, PhD, Bhavin Vadodaria, BS, James Dalton, BS, Marcus L Valentine, PhD, Li Ding, PhD, Charles Lu, PhD, Robert S. Fulton, PhD, Lucinda Fulton, PhD, Yashodan Tabib, PhD, Kerri Ochoa, Meenakshi Devidas, PhD, Deqing Pei, Cheng Cheng, PhD, William E. Evans, PharmD, Ching-Hon Pui, MD, Sima Jeha, MD, Richard C. Harvey, PhD, I-Ming L Chen, DVM, MS, Cheryl L. Willman, MD, Guido Marcucci, MD, Clara D. Bloomfield, MD, Jessica Kohlschmidt, PhD BS, MS, Krzysztof Mrozek, MD PhD, Elisabeth Paietta, PhD, Martin S. Tallman, MD, Wendy Stock, MD, Peter M. Voorhees, MD, Janis Racevskis, MD, Jacob M. Rowe, MD, Selina Luger, MD, Steven M. Kornblau, MD, Sheila A Shurtleff, PhD, Susana C. Raimondi, PhD, Elaine R Mardis, PhD, Richard K Wilson, PhD, Stephen P Hunger, MD, Mignon L. Loh, MD, James R. Downing, MD, Charles G. Mullighan
Journal: Blood
Blood (2015) 126 (23): 693.
https://doi.org/10.1182/blood.V126.23.693.693
Published: 2015
Journal Articles

PAX5 is a tumor suppressor in mouse mutagenesis models of acute lymphoblastic leukemia

Jinjun Dang, Lei Wei, Jeroen de Ridder, Xiaoping Su, Alistair G. Rust, Kathryn G. Roberts, Debbie Payne-Turner, Jinjun Cheng, Jing Ma, Chunxu Qu, Gang Wu, Guangchun Song, Robert G. Huether, Brenda Schulman, Laura Janke, Jinghui Zhang, James R. Downing, Louise van der Weyden, David J. Adams, Charles G. Mullighan
Journal: Blood
Blood (2015) 125 (23): 3609–3617.
https://doi.org/10.1182/blood-2015-02-626127
Published: 2015
Includes: Supplemental data
Journal Articles

Integrated Genomic and Mutational Profiling Of Adolescent and Young Adult ALL Identifies a High Frequency Of BCR-ABL1 -Like ALL with Very Poor Outcome

Kathryn G. Roberts, PhD, Debbie Payne-Turner, Deqing Pei, MS, Jared Becksfort, Richard C. Harvey, PhD, Yongjin Li, Guangchun Song, Jinjun Cheng, MD, Jing Ma, PhD, Jinghui Zhang, PhD, Cheng Cheng, PhD, Shann-Ching Chen, PhD, I-Ming L. Chen, Meenakshi Devidas, PhD, Eric C. Larsen, MD, William L. Carroll, MD, Naomi J. Winick, MD, Nyla A. Heerema, PhD, Andrew J. Carroll, PhD, Julie M. Gastier-Foster, PhD, Elizabeth A. Raetz, MD, Ching-Hon Pui, MD, Sima Jeha, MD, James R. Downing, MD, Elisabeth Paietta, PhD, Steven M. Kornblau, MD, Guido Marcucci, MD, Wendy Stock, MD, Clara D. Bloomfield, MD, Daniela S. Gerhard, Ph.D., Mignon L. Loh, MD, Stephen P. Hunger, MD, Cheryl L. Willman, MD, Charles G. Mullighan, MBBS, MSc, MD, FRACP, FRCPA
Journal: Blood
Blood (2013) 122 (21): 825.
https://doi.org/10.1182/blood.V122.21.825.825
Published: 2013
Journal Articles

Development and Validation Of a Highly Sensitive and Specific Gene Expression Classifier To Prospectively Screen and Identify B-Precursor Acute Lymphoblastic Leukemia (ALL) Patients With a Philadelphia Chromosome-Like (“ Ph-like ” or “ BCR-ABL1-Like ”) Signature For Therapeutic Targeting and Clinical Intervention

Richard C. Harvey, PhD, Huining Kang, PhD, Kathryn G. Roberts, PhD, I-Ming L. Chen, DVM, MS, Susan R. Atlas, PhD, Edward J. Bedrick, PhD, Julie M. Gastier-Foster, PhD, Jinghui Zhang, PhD, Daniela S. Gerhard, Ph.D., Malcolm A. Smith, MD, PhD, Eric C. Larsen, MD, Elizabeth A. Raetz, MD, Naomi J. Winick, MD, William L. Carroll, MD, Eileen Stonerock, Nyla A. Heerema, PhD, Andrew J. Carroll, PhD, Shann-Ching Chen, PhD, Guangchun Song, Jared Becksfort, Michael Rusch, BA, Yongjin Li, Jing Ma, PhD, Denise Ell, Shalini C. Reshmi, PhD, Mignon L. Loh, MD, Meenakshi Davidas, PhD, Stephen P. Hunger, MD, Charles G. Mullighan, MBBS, MSc, MD, FRACP, FRCPA, Cheryl L. Willman, MD
Journal: Blood
Blood (2013) 122 (21): 826.
https://doi.org/10.1182/blood.V122.21.826.826
Published: 2013
Journal Articles

Genomic- and Transcriptomic Profiling Of Acute Lymphoblastic Leukemia With Dicentric Chromosomes

Linda Holmfeldt, PhD, Paolo Vignali, Debbie Payne-Turner, Jing Ma, PhD, Guangchun Song, Pankaj Gupta, Michael Rusch, BA, Jinghui Zhang, PhD, Nyla A. Heerema, PhD, Susana C Raimondi, PhD, Andrew J. Carroll, PhD, Stephen P. Hunger, MD, Mignon L. Loh, MD, Charles G. Mullighan, MBBS, MSc, MD, FRACP, FRCPA
Journal: Blood
Blood (2013) 122 (21): 234.
https://doi.org/10.1182/blood.V122.21.234.234
Published: 2013